Colwellia sp. MT41: CMT41_10795
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Entry
CMT41_10795 CDS
T04159
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
com
Colwellia sp. MT41
Pathway
com03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
com00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CMT41_10795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
com03400
]
CMT41_10795
Enzymes [BR:
com01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CMT41_10795
DNA repair and recombination proteins [BR:
com03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CMT41_10795
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CMT41_10795
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CMT41_10795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALO35153
UniProt:
A0A0S2JGL7
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All DBs
Position
2530548..2531993
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AA seq
481 aa
AA seq
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MNNTEQPSILWHDYETWGISPKFDKPSQFAGIRTDLELNIIGKPEMFYCQPPVDYLPHPE
ACLITGITPQKAQREGLTEAEFAARIHELFSAPNTCVAGYNNIRFDDEVTRYLFYRNFYD
PYAREWQNGNSRWDIIDMVRATYALRPEGINWPTVDRDGEEVVSFRLELLTKANGISHES
AHDAMSDVYATIAMAKLIKEKQPKLYEFIFNLKNKNHVKDLINTADMTPIVHTSSKISSA
HGCTSWFAPIIYHPVNKNAVICVDLAQDITPLLTLSSEEIKARLYTRHDELAPDEKPIPV
KLIHVNKCPMIAPAKTLLPENAERLAIPRDFCLENLALLKKHAELRDKLSDVFASSDFDN
TDVDAEQALYGGKFFSHSDKAQMDILRGLTPEQLANHPFEFQDERLGVLLFRYRARNFPL
TLSTSEQQKWQDYCQNKMQYGGKGILSLDEFMMKIENLAHEHEKDKAKMSVLKALYEYVQ
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaccgaacagccctcaattctttggcacgattatgaaacctggggtatatcg
ccaaagtttgataagccttctcaatttgccggcattcgtaccgatctcgagttaaacatt
attggcaagccagaaatgttttattgtcaaccgccggttgattacctgccacacccggaa
gcttgtttaattaccggtataacgccgcaaaaagcacaacgtgaagggctaaccgaagca
gaatttgctgcgcgcatacatgaattattttcagcgcctaatacttgtgtcgctggctat
aacaatattcgctttgatgatgaagttactcgctatttattttaccgtaacttttacgac
ccttatgcgcgtgaatggcaaaatggcaatagccgctgggatattatcgatatggtgcgg
gccacttatgccctacgccctgaaggtattaactggccaaccgttgatcgcgacggcgaa
gaagttgttagttttcgcttagagttattaaccaaagccaatggtattagtcatgagtct
gcccatgacgccatgagtgatgtttacgccactattgctatggcaaagttgatcaaagaa
aaacagccgaaactctatgagtttatttttaacttaaaaaataaaaatcacgttaaagat
ttgatcaataccgcagacatgacccccattgtccatacctcaagtaaaatatcctcggca
cacggttgtaccagttggtttgcaccgataatttatcatcccgttaataaaaatgcggtt
atttgtgtcgatttggcccaagatattacacctttattaacacttagcagtgaagaaata
aaagcgcgtttatatacccgtcatgatgagttagcgccggacgaaaagcctattccggtt
aaacttattcatgtaaataaatgtccgatgatcgcacctgcaaaaaccctattacctgaa
aatgccgagcgtttggccataccaagggatttttgtttagaaaatttagcgttattaaaa
aagcatgctgaactgagagataagctcagtgatgtttttgccagctctgattttgataat
actgacgtagatgccgagcaagcattatatggcggtaagttctttagccatagcgataaa
gcgcaaatggatattttgcgcggtttaacgccagagcaattagctaaccatccgtttgaa
tttcaagatgagcgtttaggcgtgttgttatttcgttatcgagcgagaaacttcccactc
actttatctacaagtgagcaacaaaaatggcaggattactgccaaaataaaatgcaatac
ggtggtaaaggtattttgtcactggatgaatttatgatgaagattgaaaatttagcgcac
gagcatgaaaaagataaagctaagatgtcggtactcaaagcattatatgaatatgtacaa
ggataa
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