Colwellia sp. MT41: CMT41_11950
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Entry
CMT41_11950 CDS
T04159
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
com
Colwellia sp. MT41
Brite
KEGG Orthology (KO) [BR:
com00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
com03009
]
CMT41_11950
Enzymes [BR:
com01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CMT41_11950
Ribosome biogenesis [BR:
com03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CMT41_11950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Fn3_nematode
Motif
Other DBs
NCBI-ProteinID:
ALO35354
UniProt:
A0A0S2JH66
LinkDB
All DBs
Position
complement(2788789..2789838)
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AA seq
349 aa
AA seq
DB search
MTVDKKKTTKDAAIDKKYGTRGTEKKGSAKKGLAKKGLVKKGKAKKEPEKVVKVNFQTAT
HTDSEKVQKVLARAGKGSRREMEAMISAGRVSIDGNVAFLGDRITGSELIRLDGHHVKLT
AKDEDICRVLMYNKPEGEMCTRKDPEGRPTVFDRLPKLETGRWVAVGRLDINTSGMLLFT
TDGELANRLMHPSQKIEREYAVRVFGEIDEAMLQRLRAGVKLEDGQARFQKITYSGGEGR
NHWFHVVLSEGRNREVRRLWESQEVQVSRLIRVRYGDLEMQRQLPLGGWRELQLKEVNYY
RKLVNLTLETESKVKVDEKAMDNAKSRRIRRSVKKHQQRHQQSTRRRHK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggtagataagaaaaaaacaactaaagacgcagctattgataaaaaatatggcaca
cgtggtactgaaaaaaaaggttcggccaaaaaaggcctagctaaaaaaggcttagttaaa
aaaggtaaagcgaagaaagagccggaaaaggtggtaaaagttaacttccaaaccgcgact
cataccgactcagagaaagtgcaaaaagtactagcgcgtgcaggtaagggctctcgccgt
gaaatggaagccatgatcagtgccggtcgggttagcattgacggtaatgttgctttttta
ggcgatagaattaccggctctgagctgattcgattagatggtcaccatgttaaactaacc
gccaaagatgaagatatctgtcgcgtacttatgtataacaagccagaaggtgaaatgtgt
actcgtaaagatccagaaggccgtcctaccgtttttgatcgtttaccgaaacttgaaact
ggccgttgggttgccgttggccgtttagatattaacacctcaggcatgttgttatttacc
accgatggtgagctagcaaaccgattaatgcatccatcacaaaagatcgaacgtgaatac
gctgttcgtgtttttggtgaaatcgatgaagccatgttacaaagactacgtgctggcgtt
aagttggaagatggtcaagcacgttttcaaaaaatcacttacagtggtggtgaaggccga
aatcattggttccatgtagtcttatcagaggggcgtaatagagaagtgcgtcgcttatgg
gaaagccaagaagtacaggtaagccgtcttatccgcgtgcgttatggtgatttagaaatg
cagcgccagttaccgctaggtggatggcgagaattgcagttaaaagaagttaactattat
cgtaaattagttaacttgacactggaaacggaaagtaaggttaaagttgacgaaaaagcc
atggacaatgctaagagccgtcgaattcgtcgctcggtgaaaaagcatcaacaacgccat
caacaaagtactcgtcgtcgtcataagtag
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