KEGG   Colwellia sp. MT41: CMT41_13885
Entry
CMT41_13885       CDS       T04159                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
com  Colwellia sp. MT41
Pathway
com02024  Quorum sensing
com03060  Protein export
com03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:com00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CMT41_13885
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CMT41_13885
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMT41_13885
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:com02044]
    CMT41_13885
Enzymes [BR:com01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CMT41_13885
Secretion system [BR:com02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CMT41_13885
  Eukaryotic Sec-SRP protein
   CMT41_13885
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin AAA_24 AAA_31 cobW AAA_33 KTI12 AAA_14 AAA_30 YqeC ArsA_ATPase APS_kinase AAA_16 ABC_tran DO-GTPase1 ATP_bind_1 TsaE SLFN-g3_helicase Rad17 Thymidylate_kin
Other DBs
NCBI-ProteinID: ALO35685
LinkDB
Position
complement(3256648..3258039)
AA seq 463 aa
MFDNLSDRLSKTLKNISGRGRLTEDNIKDTLREVRMALLEADVALPVIRDFIAKVKEQAV
GTDVSKSLSPGQVFVKIVQKELEAAMGEVNEGLDLKAAPPAVILMAGLQGAGKTTSVAKL
AKFLTEREKKKVLVVSVDVYRPAAIKQLETLAKEIDVAFFPSDDKQKPIDIATAAVDHAK
KNFFDVLIVDTAGRLHIDKDMMAEIQQLHAAINPIETLFTVDAMTGQDAANTAKAFNEAL
PLTGIILTKTDGDARGGAALSIRHITGKPIKFMGVGEKIEALEPFHPDRIASRILGMGDV
LSLVEEIEHKVDIKQAEKLAKKVKSGKGFNLEDFRDQLVQMKNMGGMMGMMDKLPGMGNM
SAKIKDQMDDKVTVRMEAIINSMTPGERERPDVIKGSRKRRIAAGSGTQIQDVNKLLKQF
TQMQKMMKKMSGKGGMKKMMRSMQGMMPPGGMGGGGMGGMFGR
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtttgacaatctttccgatcgcttaagtaaaacacttaaaaacattagtggccgtggc
cgtttaaccgaagacaatattaaagataccttacgcgaagttcgtatggcattactcgaa
gctgatgtcgctttgcccgtcattcgtgattttattgctaaagtaaaagagcaagcggtt
ggtaccgatgtttctaaaagcctttccccaggccaagtttttgtcaaaattgtacaaaaa
gaacttgaagcagccatgggtgaagtcaatgaagggcttgacttaaaagcggcgccacca
gccgtaatattaatggcgggtctgcaaggcgcaggtaaaacaacctccgttgctaagttg
gcaaaatttttaaccgaacgagaaaagaaaaaagtactggtggtcagtgtcgatgtctat
cgcccagcagccataaagcaacttgaaaccttagccaaagaaattgatgttgcttttttc
cctagtgatgacaaacaaaaacctattgatatagctactgctgctgttgatcatgcgaag
aaaaactttttcgatgtacttattgtcgataccgcgggtcgtttacatatagataaagac
atgatggccgagattcagcagcttcatgccgccattaatccgatagaaaccctcttcact
gttgatgccatgacaggtcaagatgcggcgaataccgccaaagccttcaatgaagcttta
ccgttaacaggtattatcttaaccaaaaccgatggtgatgcccgtggtggtgcagcgctt
tctattcgtcatattaccggtaaacctattaaatttatgggcgtcggtgaaaaaattgaa
gcgttagagcctttccatcctgatcgtattgcctcgcgtatcttgggtatgggtgatgtg
ctctcgctggttgaagaaatagagcacaaggttgatataaaacaagccgagaaattagcc
aaaaaagtcaaaagcggtaagggttttaacttagaagacttccgtgaccagctcgtgcaa
atgaaaaatatgggcggcatgatgggcatgatggataaacttccaggcatgggcaatatg
tcggctaaaataaaagatcaaatggatgacaaggtaaccgtgcgcatggaagccattata
aactctatgacaccgggcgagcgtgaacgtcctgatgttattaaaggctcacgtaaacgt
cgtattgcggctggatcgggcactcaaattcaagatgtgaataaattacttaagcaattt
actcaaatgcaaaaaatgatgaaaaaaatgtcaggcaaaggcggcatgaaaaaaatgatg
cgcagcatgcagggcatgatgccaccaggtggcatgggcggcggcggtatgggtggtatg
ttcggccgttaa

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