Colwellia sp. MT41: CMT41_14610
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Entry
CMT41_14610 CDS
T04159
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
com
Colwellia sp. MT41
Pathway
com03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
com00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CMT41_14610 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
com03400
]
CMT41_14610 (xseA)
Enzymes [BR:
com01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CMT41_14610 (xseA)
DNA repair and recombination proteins [BR:
com03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CMT41_14610 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Laminin_B
Motif
Other DBs
NCBI-ProteinID:
ALO35812
UniProt:
A0A0S2JIH7
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All DBs
Position
3439214..3440548
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AA seq
444 aa
AA seq
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MSQQHILQISELTKKVRFILESELNTVWLTGEVSNFIAASSGHWYLSLKDAKSQVKCAMF
KGSNRRVRLSNGATPKNGQQVLVRAKVSLYEPRGDFQLIIEHMEDAGTGILRQQFEQLKN
KLNAQGLFDLSHKKEIPAHINCVGIITSPTGAAVKDILTVLKRRNPNIKAIIYPALVQGE
YAQGDICHAIETANSRQECDVLIVGRGGGSLEDLWPFNEESVVRAIYKSALPVISAVGHE
IDTTLSDYVADLRAATPSAAAELVSSDSNELLNHVVMLKQRLIKALQGTLAHLGNEKSYL
QHRLSQVHPEQQLQLQQQKADELALRLKQVMKRNMVQLQGKPAQLSQRLLQQSPAKVILL
QQQQVRLNKQRISQAMQNTLQHKSERFVHLLEQLQLVSPLATIARGYSVTRNKNNAVITK
VAQVSKGDEISVQLSDGHINARVI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacagcatattttacaaatcagcgaattaactaaaaaagtacgctttatactg
gaaagtgaactaaatacggtgtggttaaccggtgaagtatctaactttatcgccgccagc
tcaggtcattggtatttatcattgaaagacgccaagtcacaagtaaaatgtgccatgttt
aagggcagtaatagacgagttcgattaagtaatggtgccacacctaagaatggccaacaa
gttttagtgcgcgctaaagtatctttatatgagccgcgcggagacttccagttaattatc
gaacatatggaagatgccggtactggtatcttgcgtcagcagtttgaacaattaaaaaac
aaactgaacgcccaaggtttatttgacttaagccataaaaaagaaatacctgcacatatc
aattgtgttggcattatcacctcgccaactggcgcagcggtgaaagatattttaacggta
ctcaaacgtcgtaatcccaatatcaaagcgattatctacccagcattagtgcaaggagaa
tatgcgcaaggcgacatttgtcatgccattgagacggccaatagccgccaagaatgtgat
gtcctcattgttggtcgaggtggtggctctttagaagatttatggccctttaatgaagaa
agtgtcgtgcgggccatttataaaagtgctctgccggtaattagcgccgtcggccatgaa
attgataccacgctaagtgactatgttgctgatttacgagccgccaccccctctgctgcc
gctgagttagtatcaagcgatagtaatgagttgcttaaccatgtagttatgcttaaacag
cggttaattaaagccctacaagggacactagcgcatttaggcaatgaaaaaagttattta
cagcacaggttatcgcaagtacaccccgagcaacagttacaattacagcaacaaaaagcc
gatgaattagcgttacgtttaaagcaagtgatgaagcgtaatatggtccagctacaaggt
aaaccggcgcaacttagccaacgattattacagcaatctccagcaaaggtaattctatta
cagcaacaacaagtccgcctaaataagcagagaattagccaagctatgcaaaacacttta
cagcataaaagtgaacgctttgtgcatttgcttgagcaattacaacttgttagcccgcta
gcgacgatagcacgaggctacagcgtcacgcgcaataaaaacaatgccgttattactaag
gttgctcaggtgagtaagggtgacgaaataagcgtgcagttaagcgatggtcatattaat
gctagggtaatctaa
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