Colwellia sp. MT41: CMT41_15135
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Entry
CMT41_15135 CDS
T04159
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
com
Colwellia sp. MT41
Pathway
com03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
com00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CMT41_15135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
com03019
]
CMT41_15135
03009 Ribosome biogenesis [BR:
com03009
]
CMT41_15135
Messenger RNA biogenesis [BR:
com03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CMT41_15135
Ribosome biogenesis [BR:
com03009
]
Eukaryotic type
Pre-60S particles
RNases
CMT41_15135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HGTP_anticodon2
Cys_box
Motif
Other DBs
NCBI-ProteinID:
ALO35908
LinkDB
All DBs
Position
complement(3568177..3568722)
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AA seq
181 aa
AA seq
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MAGNDSNLIWLDLEMTGLDPDDDVILEIAIIITDSHLNILAQGPIFAINQSDEVLDNMNL
WCIEHHGQSGLTQRCRDSEVSLAHATEQSVAFVQEWVPQGKSPMCGNSIGQDRRFINKYM
PDFEEHFHYRNLDVSTIKELARRWKPEVLESVVKTGAHLALDDIKESIAELKVYRELFFK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaatgacagtaacttaatttggcttgatttggaaatgacgggactagatcct
gacgatgatgttattttagaaattgctattattatcaccgatagtcatttaaatatctta
gcgcaagggccaatatttgccatcaatcaaagtgatgaagtgctagataatatgaaccta
tggtgtattgaacatcatggtcaatcagggcttacgcaaaggtgccgtgatagcgaggta
agtttggcgcacgccaccgaacaaagtgtggcttttgtgcaagaatgggtaccgcaaggt
aagtctcctatgtgtggtaatagtatcggacaagataggcgctttataaataagtatatg
cctgacttcgaagagcattttcattatcgtaatctagatgttagtaccataaaagagctg
gctcggcgttggaagcctgaagtactagaatctgtggttaaaaccggcgcacatttagcg
ctcgatgatataaaagagtctattgctgagttaaaagtttatagagaactcttcttcaaa
ctatag
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