Colwellia sp. MT41: CMT41_17875
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Entry
CMT41_17875 CDS
T04159
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
com
Colwellia sp. MT41
Pathway
com03030
DNA replication
com03430
Mismatch repair
com03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
com00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMT41_17875
03430 Mismatch repair
CMT41_17875
03440 Homologous recombination
CMT41_17875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
com03032
]
CMT41_17875
03400 DNA repair and recombination proteins [BR:
com03400
]
CMT41_17875
Enzymes [BR:
com01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMT41_17875
DNA replication proteins [BR:
com03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMT41_17875
DNA repair and recombination proteins [BR:
com03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMT41_17875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
Rv2179c-like
Cortex-I_coil
Motif
Other DBs
NCBI-ProteinID:
ALO36773
LinkDB
All DBs
Position
4210519..4211205
Genome browser
AA seq
228 aa
AA seq
DB search
MFSWLLGYEAKRKLLLKKAPAGVLHDFLSVPLPNINTPIDKVAILAVDFETTGLNAKQDK
LLSVGYITLQQQQISLKSSYHQIIKSKAQLEESNVIIHHITDSQKEQGQALATVVASLLQ
ALAGKVMLVHFARIEKQFLTEACYELYGMAPSFPMIDTLALAKRRLDKRDVAYDPSELRL
ASLRHKIQLPEHHGHNALNDAIATAELFMAQMSKVNKDGKITLKDVLL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgttctcttggctgctgggttatgaagccaagcgtaaactgttattaaaaaaagcaccg
gcgggcgtgttacatgattttttatctgtgcctttacccaatataaatactcccattgat
aaagtcgctattttggcggtggattttgaaacaacgggccttaatgccaaacaagataaa
ttactgagtgtcggttatatcacccttcaacagcaacaaatttcactcaagtccagctac
catcaaattatcaaaagcaaagcacaacttgaagaaagtaatgtcattattcatcacatt
actgatagccaaaaagagcaaggacaagccttagcaactgtggtggcatctttactgcaa
gcactggcgggtaaagtgatgctggtacattttgctcgtattgaaaaacaatttttgact
gaagcttgttatgagctttatggcatggcacccagtttccctatgatagataccctggca
ctggctaagcgccgcttagataaacgcgatgttgcttatgatccctccgaattgcgcctt
gccagcctacgtcataaaatacaattacccgagcaccatggccataatgccctcaacgat
gctattgctaccgccgaattatttatggcacaaatgagtaaagtcaataaagatggcaag
attacgctgaaagatgtcttactctag
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