Comamonas sp. B21-038: MJ205_00350
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Entry
MJ205_00350 CDS
T10658
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
comb Comamonas sp. B21-038
Pathway
comb00470
D-Amino acid metabolism
comb00550
Peptidoglycan biosynthesis
comb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MJ205_00350 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MJ205_00350 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
comb01011
]
MJ205_00350 (murD)
Enzymes [BR:
comb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MJ205_00350 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
comb01011
]
Precursor biosynthesis
Amino acid ligase
MJ205_00350 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
2-Hacid_dh_C
Sacchrp_dh_NADP
NAD_binding_7
ThiF
3HCDH_N
Pyr_redox_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ULR91469
LinkDB
All DBs
Position
81309..83018
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AA seq
569 aa
AA seq
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MAPVPDVSTLTAAKDAAAFVAQIFADPGVSDAASSEVTAVDIQPQEAEVVYAPVPAQWPQ
GQEHALQGQHVLVLGLGTSGLAMARWCARCGAQVTVADTREAPPQLAQLRSELPDVRFVA
GALTAALVDGQPVRVVYRSPGLSPETVAPVVDAARAIGLPVSGELDLFSLALQSLAQAHG
YVPKVLAITGTNGKTTVTSLTGQLLAHAGMSTAVAGNIGPSLLDTLSQHIDAQSLPQAWV
LELSSFQLEDAHAFNPTAATVLNLSQDHLDWHGSMAAYAGAKAKIFGSDALMVLNRDDPA
VMAMLPPPVRIKLQRPQLRPHISFGLDLPTQPGDYGLEVVNGMAWLVRAQDDGNSASNKR
NQTAADDVFLQRLMPADALRIRGRHNAMNALAALALGHAAGAGFAPMLFGLREYRGERHR
VEPIGIVSDVEYFDDSKGTNVGATVAALMGLGAERRIVLILGGEGKGQDFSPLAAPVLRY
ARAVVLIGRDAPLIEAALADTGVPLLHAPSMDEAVLLASQKAVAGDAVLMSPACASFDMF
QNYGHRAEVFCQAVAALAEERGTSLEVQP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggttcccgatgtgtcgaccctgacggccgccaaggacgcggccgcctttgtg
gcgcagattttcgccgatcctggcgtgtccgatgcggccagcagtgaagtgaccgccgtg
gatatacagccgcaggaggccgaggtggtttatgccccggtgcctgcgcagtggccgcag
gggcaggagcatgcgctgcaaggacagcatgtgctggtgctgggcctgggtacttccggt
ctggcgatggcgcgctggtgtgcgcgctgcggcgcccaggtgacggtggccgatacacgc
gaggctccgccccagttggcacagctgcgcagcgagctgcccgatgtgcgctttgtcgcg
ggcgctttgaccgccgcgctggtcgatggccagccggtgcgcgtggtctaccgctcgccc
ggcctgagccccgagaccgtggcgcctgtcgtcgatgcagcgcgcgccattggcttgccg
gtcagcggtgagctggatctgttcagcctggccctgcagtcgctggcccaggcgcacggc
tatgtgcccaaggtgctggcgatcacggggaccaatggcaagaccacggtgacctcgttg
acggggcagctgctggcccatgccggcatgtccaccgctgtggccggcaatatcggcccc
agcctgcttgacacgctgtcacagcacatcgatgcgcaaagcctgccgcaggcctgggtg
ctggagctgtccagcttccagctcgaagatgcgcatgccttcaacccgacggcagcgacg
gtactcaacctcagccaggaccacctggactggcatggcagcatggcggcctatgctggt
gccaaggccaagattttcggcagcgatgcgctgatggtgctcaaccgcgacgacccggcc
gtgatggccatgctgccgccaccggtgcgcatcaagctgcagcgcccccaactgcgcccg
cacatcagctttgggctggatctgcccacccagccgggcgactatggcctggaagtggtc
aacggcatggcctggctggtgcgtgcacaggacgatggcaacagcgccagcaacaagcgc
aaccagacggcagcggacgatgtgttcctgcagcggctgatgcctgctgacgcgttgcgc
atccggggccgccacaacgcgatgaatgcgctggctgcgctggcgctgggccatgccgca
ggcgccggttttgcgccgatgctgtttggcctgcgcgaataccggggcgagcgccaccgg
gtcgagcccatcggcatcgtcagcgatgtggaatattttgacgacagcaagggcaccaat
gtgggtgccaccgtggccgcgttgatgggcctgggtgccgagcgccgcatcgtgctgatc
ctgggcggcgagggcaagggccaggatttctcgccgctggccgcgcctgtgctgcgctac
gcgcgcgccgtggtgctgattggccgcgatgcgccgctgatcgaggctgcactggccgac
accggtgtgcccctgctgcacgcgcccagcatggacgaagccgtgctgctggccagccag
aaggccgtcgccggcgacgcggtgctgatgtcccccgcctgcgccagctttgacatgttc
caaaactacggccaccgcgccgaggtgttttgccaggccgtggcggcgctggctgaagag
cgcggcaccagtctggaggtgcagccatga
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