Comamonas sp. B21-038: MJ205_00425
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Entry
MJ205_00425 CDS
T10658
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
comb Comamonas sp. B21-038
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
comb03016
]
MJ205_00425
Enzymes [BR:
comb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MJ205_00425
Transfer RNA biogenesis [BR:
comb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MJ205_00425
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Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
ULR89405
UniProt:
A0AAN0MQX0
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All DBs
Position
complement(96964..99030)
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AA seq
688 aa
AA seq
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MYALFDDAGKFLAGRILSEAESSAQIELDSGKRVKVKAANLLLKFDKPTPAELIAQAQTL
SDDIDPQLAWEFAPEQEFGFADLARDYFSENASITEQVAALFKLFEAPHYFRRAGKGRFK
KAPAEIVQQALAAIEKKAQLQAQIDAWAVELVNGQCPAPVQQQLYKILFRPDKNAPEYKA
VVEASRKAQLAPLALLQKAGAIDSSYQFHWQRFLFDNFPKGTGFPAVTAPLPPADLPLAT
VEAYSIDDSATTEIDDALSVQGLGSGQVIVGVHIAAPGLAIEPGSALDHLGRSRYSTVYM
PGYKVTMLPDEVVQIYTLDEGRANPAVSLYVTYDEATLEVLNKETRLERVPVVTNFRYDK
LDHIATEAWLTDPALQVEDTPQSLLDKRAELSFLYRLSRHLKAGREEVRGKPENFNRPDY
NFRLQGHGDQVPDGTETVQISVRKRGAPLDLIVAEAAIVANSSWGQLLADYGVPGIYRSQ
ASLAPGIKVRMSTKALPHAGIGVKSYVWATSPLRRYTDLVNQWQIIACARHGATAALVAP
FKPKDAELFSIISGFDAAYSAYNGYQAGMERYWTLKYLTQNHISDLTATVMKEGPAGSML
VRADELPLVFPVLGAQSLPRGAQVRVKLGEIDEITLDVTGTVLERLDDEQANQAETESPE
DEEEAVAGPIAIAVDMSDGEDAATTKTD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcactgttcgacgacgctggcaaatttctggccggccgtatcctctccgaagct
gaaagctctgcacaaattgaactggactccggcaaacgggtcaaggtcaaggccgcgaac
ctgcttctcaaatttgacaagcccacgcctgccgagctgatcgcacaggcgcaaaccctg
tcggacgacatcgacccccagcttgcctgggagtttgcgcccgagcaggagtttggcttt
gccgacctggcacgcgactacttctccgagaacgcctcgatcaccgaacaggtggccgcg
ctcttcaaactgttcgaggcaccgcactacttccgccgcgcgggcaagggccgcttcaag
aaggcgccggccgagatcgtgcagcaagcgctggccgcgatcgagaaaaaggcccagctc
caggcgcagatcgacgcctgggcggtcgagctcgtcaatggccagtgcccggccccggtg
cagcagcagctctacaagattctgttccgccccgacaagaacgcgccggagtacaaggcg
gtcgtcgaggccagccgcaaggcgcagctggcaccgctggcgctgctgcaaaaggccggc
gccatcgattcgtcctaccagttccactggcagcgcttcctgtttgacaactttcccaag
ggcacgggctttcccgcggtcacggcgccgctgccaccggccgatttgccgctggccaca
gtggaggcctactccatcgacgattcggccacgaccgaaatcgacgatgcgctgtcggta
cagggcctgggctctggccaggtgatcgtcggcgtgcacattgccgcgcctggtctggcg
atcgagcccggctcggcgctcgaccacctgggccgcagccgctactccaccgtctacatg
ccgggctacaaggttacgatgctgcccgacgaagtggtgcagatctacacgctggatgaa
ggccgcgccaacccggcagtgtcgctctacgtcacctatgacgaagcaacgctggaagtg
ctgaacaaggaaacgcgcctggagcgcgtgcccgtcgtcaccaacttccgctacgacaag
ctcgaccatatcgccaccgaagcctggctgaccgatccggcgctgcaggtcgaagacacg
ccccagtccctgctggacaagcgcgccgagctgagctttctctaccgcctctcgcgccac
ctcaaggccggccgcgaagaggtgcgcggcaagcccgagaacttcaaccgccccgactac
aacttccgcctgcaaggccatggcgaccaggtgcccgacggcaccgagaccgtgcagatc
tccgtgcgcaagcgcggcgcaccgctcgatttgatcgtggcggaagcagccatcgtcgcc
aacagcagctggggccagttgctggccgactatggtgtgcccggtatctaccgcagccag
gccagtctggcaccgggcatcaaggtgcgcatgtccaccaaggcgctgccgcacgcgggc
attggcgtcaagagctatgtctgggccacctcgccgctgcgccgctacaccgacctggtc
aaccagtggcaaatcatcgcctgtgcccgccacggcgccaccgctgccctggttgcaccg
ttcaagcccaaggatgcggagctgttctcgatcatcagcggctttgacgccgcctacagt
gcctacaacggctaccaggccggcatggagcgctactggaccctgaagtacctgacccag
aaccacatcagtgacctcactgcaacagttatgaaggaaggcccggcgggcagcatgctg
gtgcgcgcagatgaactaccattggtgtttccggtgctgggtgcgcagagtctgccgcgt
ggtgcccaggtccgggtcaagctcggcgagatcgacgagatcacgctggatgtgacagga
acggtgctggagagactggacgacgaacaggccaaccaggccgagacagagtcgccagaa
gacgaggaggaggctgtggctgggcccatcgcaatcgcggtggacatgagcgacggtgag
gacgcggcgaccacaaaaaccgattaa
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