KEGG   Comamonas sp. B21-038: MJ205_00425
Entry
MJ205_00425       CDS       T10658                                 
Name
(GenBank) RNB domain-containing ribonuclease
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
comb  Comamonas sp. B21-038
Brite
KEGG Orthology (KO) [BR:comb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:comb03016]
    MJ205_00425
Enzymes [BR:comb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     MJ205_00425
Transfer RNA biogenesis [BR:comb03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MJ205_00425
SSDB
Motif
Pfam: RNB Myosin_N
Other DBs
NCBI-ProteinID: ULR89405
UniProt: A0AAN0MQX0
LinkDB
Position
complement(96964..99030)
AA seq 688 aa
MYALFDDAGKFLAGRILSEAESSAQIELDSGKRVKVKAANLLLKFDKPTPAELIAQAQTL
SDDIDPQLAWEFAPEQEFGFADLARDYFSENASITEQVAALFKLFEAPHYFRRAGKGRFK
KAPAEIVQQALAAIEKKAQLQAQIDAWAVELVNGQCPAPVQQQLYKILFRPDKNAPEYKA
VVEASRKAQLAPLALLQKAGAIDSSYQFHWQRFLFDNFPKGTGFPAVTAPLPPADLPLAT
VEAYSIDDSATTEIDDALSVQGLGSGQVIVGVHIAAPGLAIEPGSALDHLGRSRYSTVYM
PGYKVTMLPDEVVQIYTLDEGRANPAVSLYVTYDEATLEVLNKETRLERVPVVTNFRYDK
LDHIATEAWLTDPALQVEDTPQSLLDKRAELSFLYRLSRHLKAGREEVRGKPENFNRPDY
NFRLQGHGDQVPDGTETVQISVRKRGAPLDLIVAEAAIVANSSWGQLLADYGVPGIYRSQ
ASLAPGIKVRMSTKALPHAGIGVKSYVWATSPLRRYTDLVNQWQIIACARHGATAALVAP
FKPKDAELFSIISGFDAAYSAYNGYQAGMERYWTLKYLTQNHISDLTATVMKEGPAGSML
VRADELPLVFPVLGAQSLPRGAQVRVKLGEIDEITLDVTGTVLERLDDEQANQAETESPE
DEEEAVAGPIAIAVDMSDGEDAATTKTD
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgtatgcactgttcgacgacgctggcaaatttctggccggccgtatcctctccgaagct
gaaagctctgcacaaattgaactggactccggcaaacgggtcaaggtcaaggccgcgaac
ctgcttctcaaatttgacaagcccacgcctgccgagctgatcgcacaggcgcaaaccctg
tcggacgacatcgacccccagcttgcctgggagtttgcgcccgagcaggagtttggcttt
gccgacctggcacgcgactacttctccgagaacgcctcgatcaccgaacaggtggccgcg
ctcttcaaactgttcgaggcaccgcactacttccgccgcgcgggcaagggccgcttcaag
aaggcgccggccgagatcgtgcagcaagcgctggccgcgatcgagaaaaaggcccagctc
caggcgcagatcgacgcctgggcggtcgagctcgtcaatggccagtgcccggccccggtg
cagcagcagctctacaagattctgttccgccccgacaagaacgcgccggagtacaaggcg
gtcgtcgaggccagccgcaaggcgcagctggcaccgctggcgctgctgcaaaaggccggc
gccatcgattcgtcctaccagttccactggcagcgcttcctgtttgacaactttcccaag
ggcacgggctttcccgcggtcacggcgccgctgccaccggccgatttgccgctggccaca
gtggaggcctactccatcgacgattcggccacgaccgaaatcgacgatgcgctgtcggta
cagggcctgggctctggccaggtgatcgtcggcgtgcacattgccgcgcctggtctggcg
atcgagcccggctcggcgctcgaccacctgggccgcagccgctactccaccgtctacatg
ccgggctacaaggttacgatgctgcccgacgaagtggtgcagatctacacgctggatgaa
ggccgcgccaacccggcagtgtcgctctacgtcacctatgacgaagcaacgctggaagtg
ctgaacaaggaaacgcgcctggagcgcgtgcccgtcgtcaccaacttccgctacgacaag
ctcgaccatatcgccaccgaagcctggctgaccgatccggcgctgcaggtcgaagacacg
ccccagtccctgctggacaagcgcgccgagctgagctttctctaccgcctctcgcgccac
ctcaaggccggccgcgaagaggtgcgcggcaagcccgagaacttcaaccgccccgactac
aacttccgcctgcaaggccatggcgaccaggtgcccgacggcaccgagaccgtgcagatc
tccgtgcgcaagcgcggcgcaccgctcgatttgatcgtggcggaagcagccatcgtcgcc
aacagcagctggggccagttgctggccgactatggtgtgcccggtatctaccgcagccag
gccagtctggcaccgggcatcaaggtgcgcatgtccaccaaggcgctgccgcacgcgggc
attggcgtcaagagctatgtctgggccacctcgccgctgcgccgctacaccgacctggtc
aaccagtggcaaatcatcgcctgtgcccgccacggcgccaccgctgccctggttgcaccg
ttcaagcccaaggatgcggagctgttctcgatcatcagcggctttgacgccgcctacagt
gcctacaacggctaccaggccggcatggagcgctactggaccctgaagtacctgacccag
aaccacatcagtgacctcactgcaacagttatgaaggaaggcccggcgggcagcatgctg
gtgcgcgcagatgaactaccattggtgtttccggtgctgggtgcgcagagtctgccgcgt
ggtgcccaggtccgggtcaagctcggcgagatcgacgagatcacgctggatgtgacagga
acggtgctggagagactggacgacgaacaggccaaccaggccgagacagagtcgccagaa
gacgaggaggaggctgtggctgggcccatcgcaatcgcggtggacatgagcgacggtgag
gacgcggcgaccacaaaaaccgattaa

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