Comamonas sp. B21-038: MJ205_06530
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Entry
MJ205_06530 CDS
T10658
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
comb Comamonas sp. B21-038
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
comb03016
]
MJ205_06530 (truB)
Enzymes [BR:
comb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MJ205_06530 (truB)
Transfer RNA biogenesis [BR:
comb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MJ205_06530 (truB)
Prokaryotic type
MJ205_06530 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ULR90506
UniProt:
A0AAN0KS28
LinkDB
All DBs
Position
1456819..1457811
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AA seq
330 aa
AA seq
DB search
MNASRTRVQRRPVHGVFLLDKPIGLSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLQLDAPKTYEALVHLGATTTTGDAEGEVLQTWKVDTQALSSENLAAVAARF
TGPISQVPPMYSALKRDGKALYEYARAGITLEREPRAVTILHLTLSRVEEEQAYVALKMT
VRCSKGTYVRTLAEDIGQALGYGAHLRSLRRIETGGIDLSRCISLQTLEATPDAERLQTV
LPVDTLLAAHTRVTLDGDNAGRFLSGLRRRGEWADADAVAVYGEEPPALLGVAHIRAREL
IPDRLLSPVEIQQILEGTPRPQASGILETS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcctctcgcacacgggtgcagcggcgccctgtgcacggggtgtttctgcttgat
aaacccattggcctgtccagcaacgacgctttgcaaaaagtgaagtggctgctgcgcgcc
gaaaaagcgggccataccggcacgctcgaccctttggccaccggtgtgctgccgctgtgt
tttggcgcggccaccaagttcagccaattgcagctcgatgcccccaagacctatgaggcc
ctggtgcacctgggcgccaccaccaccaccggcgatgccgagggagaggtgctgcagacc
tggaaggtggacacacaggcgctgagctccgaaaacctggctgctgtggcggcccggttc
accggacccatcagccaggtgccgccgatgtacagcgcgctcaagcgcgatggcaaggcc
ctctacgaatatgcccgtgccggcatcacgctcgagcgtgagccgcgcgccgtgaccatc
ttgcatctgacgctctcccgcgttgaagaagagcaggcgtatgtcgcgctcaagatgacg
gtgcgctgcagcaagggcacctatgtgcgtacgctggccgaggatattggccaggcgctt
ggctatggcgcgcatctgcgcagcctgcgccgcatagagaccggcgggatcgacctgtcc
cgctgcatcagcctgcaaaccctggaagcgacgcccgacgccgagcgcctgcagaccgtg
ttgcccgtcgacacgttgcttgcagcgcacacccgtgtcacgctcgatggtgataatgca
ggcagatttttgtccggcttgcgccggcggggtgaatgggccgatgccgatgcagtggcc
gtttatggagaagagcctcctgcgcttttgggtgtggcacacatccgggcgcgcgagctc
attcccgaccgcctcctgagccccgtcgagattcaacaaattttggaaggaacgccgcgc
ccacaagccagcggcattttggaaacatcatga
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