Comamonas sp. B21-038: MJ205_07190
Help
Entry
MJ205_07190 CDS
T10658
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
comb Comamonas sp. B21-038
Pathway
comb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MJ205_07190 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
comb03400
]
MJ205_07190 (uvrB)
DNA repair and recombination proteins [BR:
comb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MJ205_07190 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MJ205_07190 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
UvrD-helicase
Phage_T4_Y10B
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ULR90630
LinkDB
All DBs
Position
1598242..1600335
Genome browser
AA seq
697 aa
AA seq
DB search
MHEVTPEAPREGEFIQYPGSPFTLFQPYPPAGDQPAAIDGLVEGIDDGEAFQTLLGVTGS
GKTFTMANVIARTGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVP
QRDLFIEKDSAINEHIEQMRLSATKSVLERRDTIVVATVSAIYGIGSPESYTKMRFILRV
GDELSQRDAIAQLVRMQYKRNDADFSRGTFRVRGDTIDVFPSEHSEMAVRIELFDDEVES
LQLFDPLTGRVRQKVPRFTIYPSSHYVTPRDQVLVAVETIKEELAQRLKQLVGEGKLVEA
QRLEQRTRFDLEMLTEVGHCKGIENYSRHLSGAAPGDPPPTMTDYMPKDALMFLDESHQM
IGQLNAMYNGDKARKTTLVEYGFRLPSALDNRPLKFGEFEQRMRQVVFVSATPADYEKTH
AGKIVEQVVRPTGLVDPEVEVRPATHQVDDVLQEIHARVKVQERVLITTLTKRMAEQLTE
YLTDNGVKVRYLHSDVDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDAD
KEGFLRAERSLIQTIGRAARNMNGKAILYADRITDSMRKAMDETSRRREKQMAFNAEHGI
VPRSIVKQVRDLIDGVYSTKASDDMDRAQQVAISRAQVEDMSEKEIAKEIKRLEKQMLEA
ARNLEFEAAAQARDQLTILKQRAFGGASPGAGNTRSL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagtcactccagaggcaccccgcgagggggaattcatccaatatcccggctct
ccattcacgctgttccagccatatccgcccgctggtgaccagccggcggccatcgacggg
cttgtggaaggcattgatgacggtgaggcctttcagaccttgctgggcgtcaccggctcg
ggcaagaccttcacgatggccaatgtgattgcgcgcaccgggcgcccggccatcgtgttt
gcgcccaacaaaacgctggccgcacagctgtacagcgagttccgcgagttctttccgaag
aacgcggtggagtacttcgtcagctactacgactactaccagcccgaggcctatgtgccc
cagcgcgacctgttcatcgaaaaggacagtgccatcaacgagcacatcgagcagatgcgc
ctgtcggccaccaagagtgtgcttgagcgccgcgacaccatcgtcgtggcgaccgtatcg
gcgatctacggtatcggctcgcccgagtcctataccaagatgcgcttcatcttgcgggtg
ggcgatgagttgagccagcgcgatgcgatcgcgcagctggtgcgcatgcagtacaagcgc
aacgatgcagatttctcgcgcggcaccttccgcgtgcggggcgacaccatcgatgtgttt
ccgtccgagcacagtgaaatggcagtgcgcatcgagctgtttgatgacgaggtcgagagt
ctgcagctgttcgatccgttgaccgggcgcgtgcgccagaaggtgccgcgtttcaccatc
tacccgagcagccactatgtgacgccacgcgaccaggtgctggttgcggtagaaaccatc
aaggaagagctggcccagcgcctcaagcaattggtcggggagggcaagctggtggaggcg
cagcgcctggagcagcgcacccggttcgatctggagatgctgaccgaagtggggcactgc
aagggcattgagaactacagccgccacctctcgggcgcggcgcccggcgacccgccgccg
acgatgacggactacatgcccaaggatgcgctgatgtttctcgatgagagccaccagatg
attggccagctcaatgccatgtacaacggcgacaaggcgcgcaagaccacgttggtggag
tatggctttcgcctgcccagcgcgctggacaaccggccgctgaaatttggcgaattcgag
cagcgcatgcgccaggtggtatttgtctcggccacgccagccgactacgagaagacccat
gccggcaagatcgtcgagcaggtggtgcgtcccaccggcctggtcgatcccgaagtagag
gtgcgccccgccacccaccaggtggacgacgtgctgcaggagatccacgcgcgggtcaag
gtgcaggagcgggtgctgatcaccaccttgaccaagcgcatggccgagcagctgaccgag
tacctgaccgacaacggcgtgaaagtgcgctacctgcactccgatgtcgacaccgtcgag
cgggtcgagatcattcgcgatctgcgtctgggcacgttcgatgtgctggtcggcatcaat
ttgctgcgcgagggcctggacattcccgaggtatcgctggtggcgattctggatgcggac
aaggaaggttttctgcgtgcggagcgcagcctgatccagaccattggccgtgccgcgcgg
aacatgaacggcaaggcgatcctctatgcggaccgcatcacggactcgatgcgcaaggct
atggacgaaaccagccgccgccgggaaaagcagatggccttcaatgcggagcatggcatc
gtgccgcgcagcatcgtcaagcaagtgcgtgatttgatcgatggcgtctacagcaccaag
gccagcgatgacatggaccgtgcccagcaggtggcgatcagccgcgcccaggtcgaggac
atgtccgaaaaggagattgccaaggaaatcaagcgcctggaaaaacagatgctggaggcg
gcgcgcaatctcgagttcgaggcggcggcccaggcccgcgaccaattaaccattttgaaa
caaagggcttttggtggcgcttctccaggggcagggaatacccgcagcctctag
DBGET
integrated database retrieval system
