Comamonas sp. B21-038: MJ205_07230
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Entry
MJ205_07230 CDS
T10658
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
comb Comamonas sp. B21-038
Pathway
comb03030
DNA replication
comb03430
Mismatch repair
comb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MJ205_07230 (dnaQ)
03430 Mismatch repair
MJ205_07230 (dnaQ)
03440 Homologous recombination
MJ205_07230 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comb03032
]
MJ205_07230 (dnaQ)
03400 DNA repair and recombination proteins [BR:
comb03400
]
MJ205_07230 (dnaQ)
Enzymes [BR:
comb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MJ205_07230 (dnaQ)
DNA replication proteins [BR:
comb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MJ205_07230 (dnaQ)
DNA repair and recombination proteins [BR:
comb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MJ205_07230 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
PSA_CBD
Motif
Other DBs
NCBI-ProteinID:
ULR90637
LinkDB
All DBs
Position
1606288..1607004
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AA seq
238 aa
AA seq
DB search
MSRQIVLDTETTGLSVVDGDRVIELGCVELLNRKLTGNNLHLYFNPDRESHEDALRVHGI
TSAFLADKPRFHEKAEEIRAYLEGAELIIHNAPFDMGFLNKEFERVGMPALSSMVSGVLD
SLLMARDLFPGKRNSLDALCDRLEVDNSGRDLHGALLDAELLADVYINMTRGQEQLLSSD
SMASNNKSGSAVVIKKVDFAQFDLPVILPSDAELAAHEDVLAQLDKSSGGKTIWRKLA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccaaattgttctggatacggaaaccacgggtctgtctgtcgtcgatggtgac
cgtgtcattgagctgggctgcgtcgagctgctcaaccgcaagctcaccggcaacaatctg
cacctgtacttcaaccccgaccgggaaagccatgaagacgcgctgcgtgtgcacggcatc
accagcgcgtttctcgctgacaaaccacgctttcacgagaaggccgaagagatccgggcc
tacctggaaggcgccgagctgatcatccacaatgcacccttcgacatgggcttcctgaac
aaggagttcgagcgggtgggcatgcctgcgctgtcgagcatggtcagcggtgtgctcgac
tcgctgttaatggcgcgcgatctgttcccgggtaagcgcaattcgctcgatgccttgtgc
gatcgcctcgaagtggacaattccggccgcgacctgcatggcgctttgctcgatgccgag
ctgctggccgacgtctacatcaacatgacgcgcgggcaggagcagctgctgtcatctgac
agcatggcgtccaacaacaaatccggctcggcggtggtcatcaagaaggtggactttgcg
cagttcgatctgccggtgatcctgccttccgatgcggagctggcagcccatgaggacgtg
ctcgcgcagttggacaaatccagtggcggtaaaactatttggagaaaattggcctaa
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