Comamonas sp. B21-038: MJ205_07390
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Entry
MJ205_07390 CDS
T10658
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
comb Comamonas sp. B21-038
Pathway
comb03030
DNA replication
comb03430
Mismatch repair
comb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MJ205_07390 (dnaE)
03430 Mismatch repair
MJ205_07390 (dnaE)
03440 Homologous recombination
MJ205_07390 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comb03032
]
MJ205_07390 (dnaE)
03400 DNA repair and recombination proteins [BR:
comb03400
]
MJ205_07390 (dnaE)
Enzymes [BR:
comb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MJ205_07390 (dnaE)
DNA replication proteins [BR:
comb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MJ205_07390 (dnaE)
DNA repair and recombination proteins [BR:
comb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MJ205_07390 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
ULR90665
UniProt:
A0AAN0MS42
LinkDB
All DBs
Position
1639960..1643505
Genome browser
AA seq
1181 aa
AA seq
DB search
MFVHLRIHSEFSIIDSTNRVGDLIKFAAGDSQPAMALTDLNSLFGAIKFYKAGRGAGVKP
LLGAELTLEPEVAGGPLSRIIVLIQSQQGYLNLSELLARIWMADTIKAQPQCTWAWLEEL
SDGLILLSGAQAGPVGQALMRGDEKTARSVALRLAGLFPHRFYIELQRAGRADDESHVAA
AVALAAHLKLPVVATHPVQFTKPADFESHEARVCIAEGETLGNKKRVKRFTRDQYLKSAA
EMEALFADLPSAIANTAEIARRCSVTLQLGKYFLPDFPTPNGMPIDAYFRQASFEGLEDR
LQLLFPNEAKREAERPKYVERLEFELGIILKMGFPGYFLIVADFINWAKNNGCPVGPGRG
SGAGSLVAYVLKITDLDPIHYNLLFERFLNPERVSMPDFDVDFCQANRDRVIDYVKDLYG
RNAVSQIATFGTMAARAAIRDVGRALDMSYGFCDGISKLIPNKPGLHVTLKYPPNPPKDG
DKYTYAIKEEPILAERIEKEEDVKTLIEMAQKLEGMTRNIGMHAGGVVIAPGKLTDFCPL
YQQPGSTSAVAMYDKDDVEAVGLVKFDFLGLATLTILEIAREFIIKRHKGQENFKFEEIP
LDDARTYQLFSAGKTEAVFQFESRGMQQMLKEAKPSRLEDLIALNALYRPGPMDLIPSFV
ARKHGKEVVEYPHPLVEKVLSETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKKV
EEMVQHRATFREGASKIGIDEAKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVH
YTAEFYCGNMTVEMDNTDKLKVLYEDALKMGMTFEMPDVNRGHHRFEPVTDKVIRYGLGA
IKGTGQAAIEAIVAAREGKGTGPQGDTKGPFKSLFDFCLRVDRSKLNKRTVEALIKGGAF
DSIQLNRRALIESVDVAFEFAATTHANANQGGLFDMMGDDAVGSSTQEPPLADVLPWGIK
ERLVQEKTAIGFYLSGHLFDEVELEVRQFVRTPISQLKDSREPQTVAGIISDMRVINGQR
GKLVLFKIDDKTGVIEGSLDEATWNRHKEQLKDDEFVILSARIGQDHFSGGLRAKAQHVW
GLADARARFGRYLLVNTDRHQPDVARLIQEFPAVEEHTDEGVLRHGLKIRLGVVCGQGEA
RAGVELNLGDAARFFPSDQAMAAWSQEAGHEAIKIVYESTV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtacaccttcgcatccattccgagttttccatcatcgacagcaccaatcgcgta
ggcgatctgatcaagtttgctgcgggtgatagccagccggcgatggcgctgaccgacctg
aacagcctgttcggcgccatcaagttttacaaagcgggccggggtgcaggtgtcaaaccc
cttctgggcgccgagctgaccctggagcccgaggtggcaggcgggccgctgtcgcgcatc
atcgtgctgatccagagccagcagggctaccttaacctgtcggaactgctggcgcggatc
tggatggccgataccatcaaagcgcagccgcagtgcacctgggcctggctggaagagctg
tcggacggcctgatcctgctgtcgggcgcccaggccggccccgtcggccaggcgctgatg
cgcggggacgaaaagaccgcgcgcagcgtggcactgcgcctggcgggcctgttcccgcac
cgtttctacatcgagctgcagcgcgccggccgcgctgacgatgaaagccatgtagccgcc
gccgtggcgctggcagcgcacctcaagctgccggtggtggccacgcacccggtgcagttc
accaagcctgccgattttgaatcgcacgaggcccgtgtctgtatcgccgagggcgagacc
ttgggcaacaagaagcgcgtcaagcgcttcacccgcgaccagtacctgaagtctgctgcc
gagatggaggccctgttcgccgacctgcccagcgccatcgccaatacggccgagatcgcc
cgccgctgcagcgtcaccctgcagctgggcaagtattttctgcccgatttccccacgccc
aatggcatgccgatcgacgcgtatttccgccaggcctcgttcgaggggctggaggaccgc
ctgcaactgctgtttccgaacgaggccaagcgcgaggccgagcggcccaagtatgtcgag
cggctggagttcgagctgggcatcatcttgaagatgggtttccccggctacttcctgatc
gtggcagacttcatcaactgggccaagaacaatggctgcccggtgggaccaggccgggga
tcgggggccggttcgctggtggcctatgtgctgaagatcaccgatctggacccgattcac
tacaacctgctgttcgagcgcttcctgaacccagagcgcgtctcgatgcccgactttgac
gtggacttctgccaggccaaccgcgaccgggtgatcgactatgtgaaggacctgtacggc
cgcaatgcagtgagccagattgcgaccttcggcacgatggccgcgcgcgcggcgatccgc
gacgtgggccgtgcgctggacatgagctatggcttttgcgatggtatctccaagctgatc
ccgaacaagccgggcctgcatgtgaccttgaagtacccgcccaatcctccgaaggacggc
gacaagtacacctatgcgatcaaggaagagccgattctggccgagcgcatcgagaaggaa
gaggacgtcaagaccctgatcgagatggcgcagaagctcgaaggcatgacccgcaacatc
ggcatgcacgccggtggtgtggtgatcgccccgggcaagctgaccgatttttgcccgctc
taccagcagccgggcagcacctcggcagtggccatgtatgacaaggacgacgtcgaggct
gtgggcctggtcaagttcgacttcctgggcctggcgacgttgacgattctggagatcgcg
cgcgagttcatcatcaagcgccacaaggggcaggaaaacttcaagttcgaagagattccg
ctcgacgacgcccgcacctaccagctgttctcggccggcaagaccgaagcggtgttccag
tttgaatcgcgcggcatgcagcagatgctgaaggaggccaagcccagccgcctggaagac
ctgattgcgctgaatgcgctctaccgtccgggcccgatggacctgatccccagctttgtg
gcgcgcaagcacggcaaggaagtggtggagtacccgcatccgctggtcgagaaggtgctg
tccgagacctacggcatcatggtctaccaggagcaggtgatgcagacggcccaggtgctg
ggcggctacagcctgggcggcgccgacttgctgcgccgcgcgatgggcaagaaaaaggtc
gaggagatggtgcagcaccgcgcgactttccgcgaaggggcctccaagatcggcatcgac
gaggccaaggccgacgaagtgttcgacctgatggagaagtttgcaggctacggcttcaac
aagtcgcacgccgctgcctactcgctgctggcctaccacaccggttggctcaaggtgcac
tatacggcagagttctactgcggcaatatgaccgtggaaatggacaacaccgacaagctc
aaggtgctgtacgaagacgcgctgaagatgggcatgaccttcgagatgcccgacgtgaac
cgcggccaccaccgcttcgagccggtgaccgacaaggtgatccgctatggcctgggcgcc
atcaagggcaccggccaggccgccatcgaggccattgtggcggcgcgcgaaggcaagggc
acgggcccccagggcgataccaaggggccgttcaagagcctgttcgacttctgcctgcgc
gtggaccgcagcaagctcaacaagcgcacggtcgaagcgctgatcaagggcggcgccttt
gacagcatccagctcaaccgccgcgcgctgatcgaatcggtcgatgtggccttcgaattt
gccgccaccacccatgccaatgccaaccagggcggcctgtttgacatgatgggggatgac
gccgtgggatcgagcacgcaggagccgccgctggccgatgtgctgccctggggcatcaag
gagcggctggtgcaggagaagaccgccatcggcttttacctgtcgggccatttgtttgac
gaggtcgagctggaggtgcgccagttcgtgcgcacgccgatctcccagctcaaggacagc
cgcgagccccagacggtggcgggcatcatcagcgacatgcgcgtcatcaacggccagcgc
ggcaagctggtgctgttcaagatcgacgacaaaaccggtgtcatcgaaggatcgctggac
gaggccacctggaaccgccacaaggagcagctcaaggacgatgaattcgtcattctgagc
gcccgcatcggccaggaccatttcagcggcgggttgcgcgccaaggcccagcatgtctgg
ggtctggccgatgcgcgggcccgttttggccgctacctgctggtcaacaccgaccgccac
cagcccgatgttgcgcggctgattcaggagtttcccgcagtcgaggagcacaccgacgag
ggcgtgctgcgccacggcctcaagatccgcctgggcgtggtctgcggccagggcgaggca
cgggcgggtgtggagctcaatctgggcgatgccgcgcgctttttccccagtgaccaggcg
atggctgcctggtcccaggaagcaggccacgaagccatcaaaatcgtttacgaaagcact
gtttag
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integrated database retrieval system
