Comamonas sp. B21-038: MJ205_11220
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Entry
MJ205_11220 CDS
T10658
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
comb Comamonas sp. B21-038
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comb03032
]
MJ205_11220
03400 DNA repair and recombination proteins [BR:
comb03400
]
MJ205_11220
Enzymes [BR:
comb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MJ205_11220
DNA replication proteins [BR:
comb03032
]
Prokaryotic type
DNA Topoisomerases
MJ205_11220
DNA repair and recombination proteins [BR:
comb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MJ205_11220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ULR91364
UniProt:
A0AAN0KVE1
LinkDB
All DBs
Position
2462346..2463374
Genome browser
AA seq
342 aa
AA seq
DB search
MVKLPRPLAYVTDATPGWQRIPQGDGFVYKNQRGQVIRNAGHLDRIRKLVIPPAYTDVWI
CPDPQGHLQATGRDARGRKQYRYHPLWQEQRKQTKFDRMAAFAAKLGLIRRRIQRDLKAG
DTTQTSVSAAVVRLLDTTALRIGNDSYARENGSFGLTTLRNRHVKMRSSRIQLAFKGKSG
VEQRVELEDPRVARIVRRCQDLPGQRLFQYLDDDGQRKQLRSEHVNAYLHEIAGEDFSAK
DFRTWHASVLALSLALQSRSSDTPLTAPDIVKQVAQHLGNTVSVCRKFYIHPLVMEVCEG
PEAGARCDAYAGKLRGSSGLHAAERALMAFLARSKRGAKQRP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaactccccaggccgctggcctatgtgacggacgcaactccggggtggcagcgc
atcccgcagggggatggctttgtctacaagaaccagcgtggtcaggtgattcgcaacgcc
ggtcacctcgatcgcatccgcaagctggtgataccgcccgcctacaccgatgtctggatc
tgtccggatccgcaaggccatctgcaggccaccggccgcgatgcacgggggcgcaagcag
taccgctaccacccgctgtggcaagagcaacgcaagcagaccaagttcgaccgcatggcg
gcctttgcggccaagctggggctgatccgccggcgcattcagcgcgacctgaaagccgga
gataccacgcagacctcggtgtcggccgccgtggtccggctgctggacaccaccgcactg
cgtattggcaacgacagctatgcgcgcgagaacggatcgtttgggctgacgaccctgcgc
aaccgccatgtgaagatgcggtcatcgcgcatacagctggccttcaaaggcaagagcggc
gtggagcagcgcgtggagctcgaagacccccgcgtggcccgcatcgtgcggcgctgccag
gacttgccgggccagcgcctgttccagtacctcgatgacgacggccagcgcaagcagctg
cgctccgagcatgtcaacgcctacctgcacgagattgcaggggaagatttcagcgccaag
gactttcgcacctggcatgccagcgtgctggcactgtcgctggccttgcagtcgcgcagc
agtgatacgccgctgaccgcgcccgacatcgtcaagcaggtggcccagcacctgggcaac
acggtctccgtctgccgcaagttctacatccacccgctggtgatggaggtgtgcgaaggc
cccgaagcgggggcccgttgcgacgcgtacgccggcaagctgcggggcagctcgggattg
catgcggccgaacgtgcgctgatggcttttttggcccgcagtaagagaggcgccaagcaa
cgcccgtga
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