Comamonas sp. B21-038: MJ205_13685
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Entry
MJ205_13685 CDS
T10658
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
comb Comamonas sp. B21-038
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
comb03009
]
MJ205_13685 (rimO)
Enzymes [BR:
comb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MJ205_13685 (rimO)
Ribosome biogenesis [BR:
comb03009
]
Prokaryotic type
ribosomal protein modification factors
MJ205_13685 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
ULR87511
UniProt:
A0AAN0KFJ5
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All DBs
Position
complement(2951231..2952643)
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AA seq
470 aa
AA seq
DB search
MNTDTHAATATLDANRTPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIV
NTCGFIDDAVRESLDTIGEALAENGKVIVTGCLGAKMGDGGGNLVKQMHPSVLAVTGPHA
TQEVMDAVHTNLPKPHDPFIDLVPGSFGEAGIKLTPKHYAYLKISEGCNHRCTFCIIPSM
RGDLVSRPIGDVLKEAKALFAGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLEL
VEALGELAKPYGAWVRLHYVYPYPTVDAILPLMAQGLVLPYLDVPLQHSHPDVLKRMKRP
ASGERNLERIREWRAICPELVIRSTFIAGFPGETEEEFEHLLDFIREAEIDRAGCFAYSP
VEGATANELPGMLPAEVREARRARFMEVAEEVSAKRLERRVGQTMQVLVDKAIGLGKKGG
IARTYADAPEIDGVVHLLPPEKLSKTYKVGELIKVRIVRSQGHDLVGVPV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgatacccacgctgccactgcgacgctcgacgccaaccgaacccccaaggtg
gggttcgtcagtttgggctgccccaaagcccttaccgacagcgagctgatcctgacgcag
ttgagcgccgaggggtaccagacctccaagacctttgaaggcgccgatctggtgatcgtc
aacacctgcggcttcattgacgacgccgtgcgcgaaagcctggacacgattggcgaggcg
ctggccgagaacggcaaggtgatcgtgaccggttgcctgggcgccaagatgggcgacggc
ggcggcaacctggtcaagcagatgcaccccagcgtgctggcggtaacgggcccccatgcc
acgcaagaggtgatggacgcggtccacaccaacctgcccaagccgcatgaccccttcatc
gacctggtgcccggcagctttggcgaggcgggcatcaagctcacgcccaagcactatgcc
tacctgaagatttccgaaggctgcaaccaccgctgcaccttctgcatcatcccctcgatg
cgcggtgatctggtcagccgcccgattggcgatgtgctcaaggaagccaaggcgctgttt
gccggtggcgtcaaggagctgctggtgatcagccaggacacctccgcctacggtgtcgat
gtgaagtaccgcaccggtttctgggacggcaagccggtgaagacccgcatgctggagctg
gtggaagcgctgggcgaactggccaagccgtatggggcatgggtgcgcctgcactatgtg
tacccgtatcctacggtggacgcgatcttgccgctgatggcccaaggcctggtgctgcct
tacctggatgtgccgctgcagcacagccaccccgatgtactcaagcgcatgaagcgcccg
gccagcggcgagcgcaatctggaacgcatccgtgagtggcgtgcgatctgccccgagctg
gtgatccgctcgacctttattgccggcttccccggcgagaccgaagaagagttcgagcac
ctgctggactttatccgtgaggccgagattgaccgcgcaggctgctttgcctatagcccg
gtggaaggcgctaccgccaacgagctgcccggcatgctgcccgctgaggtgcgcgaagcg
cgccgcgcccgtttcatggaagtggccgaagaggtgtccgccaagcgcctggagcgacgt
gtgggccagaccatgcaggtgctggtcgacaaggccatcggcctgggcaagaagggtggc
atcgcccgtacctatgccgatgcgcccgagatcgacggtgtcgtgcacctgctgccgccc
gagaagctcagcaagacctacaaggtcggcgagctgatcaaggtgcgcattgtgcgcagc
cagggccatgacctggtgggtgtgccggtttag
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