Comamonas sp. B21-038: MJ205_15950
Help
Entry
MJ205_15950 CDS
T10658
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
comb Comamonas sp. B21-038
Pathway
comb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MJ205_15950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
comb02022
]
MJ205_15950
02035 Bacterial motility proteins [BR:
comb02035
]
MJ205_15950
Two-component system [BR:
comb02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
MJ205_15950
Bacterial motility proteins [BR:
comb02035
]
Pilus system
Twitching motility proteins
MJ205_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
Mg_chelatase
AAA
AAA_16
VpsR
PDE8A_N
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ULR87926
LinkDB
All DBs
Position
3455898..3457427
Genome browser
AA seq
509 aa
AA seq
DB search
MSFENTTVLVVDDEPDLRTLYELTLLREGYRVFTAGSVQEARAQLQQRRFEILITDMRLP
DGLGMELLQDLRRQSRSERAIVMTAYGSADNAVAALREGAFDYLTKPVDLKQFRQVVASA
SQGLQDAPAQAPSQAAFQAPAQPGTPPLPQDASQRELIGPSLVMQQVRERIAKVAGSMAP
ILVRGESGTGKELVAQSLHRRSQRASGPMVAVNCGAIPENLLEAEFFGARKGAYTGANQD
RDGFFQAAHGGTLFLDEIGELPLAMQAKLLRAIQERKVRPLGAQQEEAVDVRIVSATHRD
LAADVQAGRFRQDLYYRLNVIDIFIPPLRERREDLPVLCEVLLARIAHESGQPVPQLGPE
ALQALAGHALPGNVRELENLLLRSVALSDGPFLHIEPARSGGPANAAVQSIAAEQTPAYL
APAAPRVAAAPPLPSALPAHGERFPLPQDLPADLQAWLDAIERDILVRALQEFGFNRTAA
ANRLGISLRQIRYRMERLQIHDPSDGIQP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaaacaccactgttctggtcgtggacgacgagcccgacctccgaacgctt
tacgagctgaccctgctgcgtgaaggctaccgggtctttacggcgggctcggtgcaggaa
gcgcgcgcccagctgcaacagcgccgcttcgagattctgatcaccgacatgcgcctgccc
gacggcttgggcatggagctgctgcaggacctgcgccgccaaagccgcagcgagcgcgcc
atcgtgatgaccgcttacggctcggccgacaacgcggtcgcggcattgcgcgagggggca
tttgactacctgaccaagccggtcgatctcaagcagttccgccaggtggtggcatcggcc
agccagggcctgcaggatgcgcctgcacaagccccgtcgcaggccgcttttcaagcgccg
gcgcagccgggcacgcccccattgccgcaagacgcttcgcagcgcgaactgattggcccc
tcgctggtcatgcagcaggtgcgcgagcgcattgccaaggtggccggcagcatggcaccc
attctggtgcgcggcgagtcgggcaccggcaaggagctggtggcccagtcgctgcaccgc
cgcagccagcgcgccagtggcccgatggtggcggtcaactgcggcgccatccctgaaaac
ctgctcgaagccgaattctttggagcccgcaaaggggcctatacgggcgccaaccaggac
cgcgacggctttttccaggccgcccatggtggcacgctcttcctcgacgaaatcggcgag
ctgccgctagcgatgcaggccaagctcctgcgggcgatccaggagcgcaaggtgcggccg
ctgggtgcccagcaggaggaagccgtcgatgtgcgcatcgtcagcgccacccaccgcgac
ctggccgccgatgtgcaggcagggcggttccgccaggacctgtactaccgcctcaacgtc
atcgatatcttcatcccgccactgcgcgagcgccgcgaggatctgccggtgctgtgcgag
gtgctgcttgcgcgcattgcccacgaaagcggccagccggtgccccagctcggcccggag
gccttgcaagcgcttgccggccacgcactgccgggcaacgtgcgcgaactggagaacctg
ctgctgcgctctgtcgcgctgagtgacgggccgtttctgcatatcgagcctgcgcgctcc
ggggggcctgcgaacgctgcagttcagagcatcgctgccgagcagacccctgcctacctg
gcgcccgccgcgccacgggtggccgcagcaccgcccctcccctcggcgctaccggcccac
ggcgagcgctttccccttccgcaggatctgccagccgatctgcaggcctggctcgatgcc
atcgagcgcgatatcctcgtgcgtgcgctgcaggagttcggcttcaaccgcacagccgcc
gccaaccggctgggcatcagcctgcgccagatccgctaccgcatggaacggctgcagatc
cacgatcccagcgatgggatacagccctag
DBGET
integrated database retrieval system
