Comamonas sp. B21-038: MJ205_21840
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Entry
MJ205_21840 CDS
T10658
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
comb Comamonas sp. B21-038
Pathway
comb03020
RNA polymerase
Brite
Enzymes [BR:
comb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MJ205_21840 (rpoC)
Transcription machinery [BR:
comb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MJ205_21840 (rpoC)
DNA repair and recombination proteins [BR:
comb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MJ205_21840 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ULR89023
UniProt:
A0AAN0KMW7
LinkDB
All DBs
Position
4794301..4798524
Genome browser
AA seq
1407 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDEYDKNVEEYGDEFVAKM
GAEGIKDLLEGIEIDAEIERLRNDLTGSEVKVKKNAKRLKLLEAFKKSGIKPGWMVMEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFAQLEARGIATTIKAAKKEVETGTPVVWDILEEVIREHPIM
LNRAPTLHRLGIQAFEPILIEGKALQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYQATREKINGKGEGMVFSDIGEVQRALDAEQV
ERATKISVRLTEWNKNKASGEFEPTTKLVETTVGRALLSEILPKGMPFSSINKTLKKKEI
SKLINISFRKCGLKETVVFADKLLQNGFRLATRSGISIAIGDMLVPPQKAEIIARSEAEV
KEIEQQYVSGLVTAGERYNKVVDIWGKAGDEVSKVMMAQLAKEKVIDRHGKEVDQESFNA
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVITELDCGTHNGTLMRAVVEGGEVIESLRDRILG
RTAADEVLHPETRALLAKAGDLFDEDLIEELEAAGVDEVKVRTALTCETRFGLCATCYGR
DLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGIVGFN
PQMRYVTNNKGELVVISRSGEIVIQDEYGRERERHKMPYGATLSIKPDQQIKAGTVLANW
DPLTRPIITEYAGQVKFENVEEGLTVAKQVDEVTGLSTLVVIDPKHRGSAKVVRPQVKLA
DANGQEVKIPGTDHAVTIGFQVGALLQVRDGQEVGPGEVLARIPMEGQKTRDITGGLPRV
AELFEARTPKDKGALAEMTGTVSYGKETKGKVRLQITDLEGKVWEELVPKERNILVHEGQ
VVNKGELIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVIEAPGDTSYIQGEQVERSEVLNTNEAALRDGKIPAVYSNVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKAKDEMDEAERRA
IADAEAAELAGVSEEAAADTAADPAAD
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaaacaatttacgcctgatgagcatttcgatgccatc
aaaatcggcctggcttcgcccgaaaagatccgttcgtggtctttcggcgaagtgaagaag
cccgagaccatcaactaccgtaccttcaagcccgagcgcgatggtctgttctgcgccaag
atctttggcccgatcaaggactacgaatgcctgtgcggcaagtacaagcgcttgaagcac
cgcggtgtgatctgcgagaagtgcggcgttgaagtcacgcagaccaaggtgcgccgcgag
cgcatgggtcacatcgacctggccgcgccttgcgcccatatctggttcctcaagtccctg
ccttcgcgcctgggcctggtgctggacatgaccttgcgcgacatcgaacgcgtgctgtac
ttcgaagcctacgtggtgaccgaccccggcatgaccccgctgaagaagttcagcatcatg
tcggaagacgagtacgacaagaacgtcgaagagtacggtgatgaattcgtggccaagatg
ggcgccgaaggcatcaaggacctgctcgaaggcatcgagatcgatgcggaaatcgagcgc
ctgcgcaacgacctgaccggctccgaagtcaaggtcaagaagaacgccaagcgcctgaag
ctgctcgaagcgttcaagaagtccggcatcaagcccggttggatggtgatggaagtgctg
cctgtgctgcctcccgatctgcgtccactggtgccgctggacggcggccgctttgcgacc
tccgacctgaacgacctgtaccgccgcgtcatcaaccgtaactcgcgtctgcgccgcctg
ctggagctgaaggctccagagatcattgcccgcaatgaaaagcgcatgctgcaagaagcg
gtcgactcgctgctggacaacggccgccgtggcaaggccatgaccggcgcgaacaagcgt
gccctcaagtcgctggccgacatgatcaagggcaagagcggtcgtttccgccagaacttg
ctgggcaagcgcgtcgactactccggtcgttccgtgattaccgtgggcccaacgctcaag
ctgcaccagtgcggtctgcccaagctgatggcgctggagctgttcaagcctttcatcttc
gcgcagctcgaagcgcgtggcatcgccacgaccatcaaggccgccaagaaggaagtggaa
accggcacccccgtggtgtgggacatcctggaagaggtgatccgcgagcatccgatcatg
ctcaaccgcgcacctacgctgcaccgtctgggtatccaggcgttcgagcctatcctgatc
gaaggcaaggccctgcaactgcacccgctggtttgcgcggcattcaacgctgacttcgac
ggtgaccagatggctgttcacgtgccgctgtcggtggaagcacagatggaagcccgcacc
ctgatgctggcctccaacaacgtgctgttccccgcttcgggcgaaccctcgatcgttcct
tctcaggacgtggtgctgggcctgtaccaggccacccgcgagaagatcaacggcaagggc
gaaggcatggtgttctccgacatcggcgaagtgcaacgcgcactggatgccgagcaggtc
gagcgcgccaccaagatcagcgtgcgtctgaccgagtggaacaagaacaaggcctccggt
gagttcgagccgacgaccaagctggtggaaaccaccgttggccgtgccctgctgtccgag
attctgcccaagggtatgcctttctcttcgatcaacaagacgttgaagaagaaggaaatc
tccaagctgatcaacatctcgttccgcaagtgcggtctgaaggaaaccgtggtgttcgcc
gacaagctgctgcaaaacggcttccgtctggcaacgcgctccggtatctcgatcgccatc
ggcgacatgctggtgccaccgcaaaaggccgagatcatcgcccgctccgaagcggaagtg
aaggaaatcgagcagcagtacgtctccggtctggtcaccgctggcgagcgctacaacaag
gtggtggacatttggggcaaggccggtgacgaagtctccaaggtcatgatggcccagctg
gccaaggaaaaggtcattgaccgccatggcaaggaagtcgatcaggaatcgttcaacgcg
atttacatgatggccgactccggcgcccgtggctcggccgcacagatccgccagctggca
ggtatgcgtggtctgatggccaagcctgacggctcgatcatcgagacccccatcacggcg
aacttccgtgaaggtctgaacgtgttgcagtacttcatctccacccacggtgcccgtaag
ggtctggcggatacggcgctgaagacggccaactccggttacctgacgcgccgtctggtg
gacgtgacgcaggacttggtgatcaccgagctcgactgcggcacgcacaacggcacgttg
atgcgcgctgtggtcgaaggcggtgaagtgatcgagtcgctgcgcgaccgtatcctgggc
cgtaccgctgcggacgaagtgctgcaccctgagacccgcgccctgttggccaaggctggc
gatctgttcgacgaagacctgatcgaagagctggaagctgctggtgtggacgaagtgaag
gtgcgcacggcactgacctgcgaaacccgcttcggtctgtgcgccacttgctacggccgc
gacctgggccgtggcggcctgatcaacctcggcgaagccgtcggtgtgatcgctgcccag
tccatcggtgagcctggcacgcagctgaccatgcgtacgttccacatcggtggtgcggcg
tcgcgtgcggcagtggcctccagcgtggaagccaagtccaacggtatcgtgggcttcaat
ccacagatgcgctatgtgaccaacaacaagggcgaactggtcgtgatttcccgctccggc
gaaatcgtgatccaggacgagtacggccgcgagcgtgagcgtcacaagatgccttacggt
gcaacgctgtcgatcaagcctgatcagcagatcaaggcaggtaccgtgttggccaactgg
gatccgctgacccgcccgatcattaccgaatacgccggtcaggtgaagttcgagaatgtc
gaagaaggtctgacggtggccaagcaggtcgacgaagtgaccggtctgtccaccctggtg
gtgatcgatccgaagcaccgtggctctgccaaggtggtgcgtccgcaggtcaagctggca
gatgccaacggccaggaagtcaagattcctggtaccgaccacgcggtgacgatcggcttc
caggtcggcgctctgctgcaggtgcgcgatggccaggaagtgggccccggcgaagtgctg
gcccgtatcccgatggaaggccagaagacccgcgacattaccggtggtctgccacgtgtg
gccgaactgttcgaagcccgtacgccgaaggacaagggcgcgctggccgagatgaccggt
accgtgtcctacggtaaggaaaccaagggcaaggtgcgcctgcagatcaccgatctggaa
ggcaaggtctgggaagagctggttcccaaggaacgcaacatcctggtgcacgaaggccag
gtggtcaacaagggcgagctgatcgtcgacggcccagccgatccgcaggacatcctgcgc
ctgctgggtatcgaagagctctcgcgctacatcgtggacgaagtgcaggacgtgtaccgc
ttgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcgc
cgtgtggtcatcgaagccccgggtgatacctcttacatccagggtgagcaggtcgagcgc
tccgaagtgctcaacaccaacgaagctgcactgcgcgatggcaagatccctgcggtctac
tccaacgtgttgctgggtatcaccaaggcttcgctgtcgaccgactccttcatctcggcc
gcttccttccaggaaacgacccgcgtgctgaccgaggctgccatcatgggcaagcgcgac
gagctgcgtggcctgaaggaaaacgtcatcgtgggtcgtctgatccccgctggtaccggt
ctggcttaccaccaggcgcgcaaggccaaggacgaaatggacgaggccgagcgccgcgcg
attgccgatgcggaagcggccgagctggccggtgtgtccgaagaagccgctgcggacacc
gctgcagaccctgctgctgactaa
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