Comamonas sp. B21-038: MJ205_22420
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Entry
MJ205_22420 CDS
T10658
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
comb Comamonas sp. B21-038
Pathway
comb00053
Ascorbate and aldarate metabolism
comb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
MJ205_22420 (garD)
Enzymes [BR:
comb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
MJ205_22420 (garD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF_GD_AH
Motif
Other DBs
NCBI-ProteinID:
ULR89123
LinkDB
All DBs
Position
4920548..4922119
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AA seq
523 aa
AA seq
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MTQARTTPLSISMHAADNVAIIANDGGLPAGTVLPSGLRLVEQVPQAHKVALVDIAQGAA
VRRYNVVIGYARQAIAAGSWVHERLLQMPEARSLEGLPIATVPAPDLPPLDGYTFEGYRN
ADGTVGTRNILAITTTVQCVAGVLDFAVRRIKAELLPRYPHVDDVVGLEHSYGCGVAIDA
VGADIPQRTLRNISHNPNFGGEVMVVSLGCEKLQPERLLPPGSFPIADERAPELDVVCLQ
DEAHVGFMSMVQSIMTRAEAHLARLNQRRRETVPASALVVGVQCGGSDAFSGVTANPAVG
FCTDLLVRAGATVMFSEVTEVRDGIDQLTSRASSPEVAQAMIDEMAWYDAYLDKGKVDRS
ANTTPGNKKGGLSNIVEKAMGSIIKSGTAPITGVLSPGQRLAERGIQRGLVYAATPASDF
ICGTLQLAAGMNLHVFTTGRGTPYGLAQVPVIKVATRSDLARRWHDLMDVNAGRIADGEA
TIEEMGWEMFRLILEVASGRRKTWAEQWQLHNALVLFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagccagaacgacccccctttcgatttccatgcatgcggcggacaacgtcgcg
atcatcgccaatgacggcggtctgcccgccggcactgtgctgccttcgggcctgcgcctg
gtcgagcaggtgccgcaggcccacaaggtggccttggtggacattgcgcagggcgcggct
gtgcgccgctacaacgtggtcatcggctatgcgcgccaggccatcgcggcgggcagctgg
gtgcatgagcgcctgctgcagatgcccgaggcccgctcgctcgaaggcctgccgatcgcc
accgtgccagcgcccgatctgccgccgctggacggctataccttcgagggctaccgcaat
gccgatggcacggtgggcacgcgcaatatcctggccatcaccaccacggtgcagtgcgtg
gctggggtactggattttgcagtgcgccgcatcaaggccgagctgctgccgcgctacccg
catgtcgacgatgtcgtcgggctggagcacagctatggctgtggcgtggcgattgatgcg
gtgggtgccgacataccgcagcgcaccctgcgcaacatcagccacaacccgaactttggc
ggcgaggtgatggtcgtgagcctgggctgcgaaaagctgcagcccgagcgcctgctgccg
ccgggctccttcccgatcgccgacgagcgcgcgcccgagctcgatgtggtctgcctgcag
gacgaggcccatgtgggcttcatgtcgatggtgcagtcgatcatgacgcgggccgaggcg
cacctggcgcggctgaaccagcgccggcgcgagacggtgccggccagtgccctggtggtg
ggcgtgcagtgcggcggcagcgatgcgttcagcggcgtcaccgccaacccggccgtcggc
ttttgcaccgatctgctggtgcgcgccggtgccacggtgatgttcagcgaagtgaccgag
gtgcgcgatggcattgaccagctgacctcacgcgcctccagccccgaggtggcgcaggcc
atgatcgacgagatggcctggtacgacgcctacctggacaagggcaaggtggaccgcagc
gccaacaccacgccgggcaacaagaaaggcggcctgtccaacatcgtggaaaaggcgatg
ggctcgatcatcaagagcggcaccgcgccgatcactggcgtgctgtcacccggccaacgg
ctggccgagcgcggtatccagcgcggcctggtctatgcggccacgcccgcgagcgacttc
atctgcggcaccttgcaactggccgccggcatgaacctgcatgtgttcaccaccgggcgc
ggcacgccgtatgggctggcgcaggtgccggtgatcaaggtggccacgcgcagcgatctg
gcgcgccgctggcatgacctgatggacgtgaacgccgggcgcattgccgatggcgaagcg
accatcgaggagatgggctgggagatgttccgcctgatactggaggtggccagcggccgc
aggaagacctgggccgagcaatggcagctgcacaatgcgctggtgctgttcaaccccgca
ccggtgacctga
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