Comamonas sp. B21-038: MJ205_23000
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Entry
MJ205_23000 CDS
T10658
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
comb Comamonas sp. B21-038
Pathway
comb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
comb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MJ205_23000 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
comb03021
]
MJ205_23000 (rpoA)
03400 DNA repair and recombination proteins [BR:
comb03400
]
MJ205_23000 (rpoA)
Enzymes [BR:
comb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MJ205_23000 (rpoA)
Transcription machinery [BR:
comb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MJ205_23000 (rpoA)
DNA repair and recombination proteins [BR:
comb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MJ205_23000 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ULR89227
LinkDB
All DBs
Position
5044088..5045083
Genome browser
AA seq
331 aa
AA seq
DB search
MQTNLLKPKTINVEQLGHNRAKVELEPFERGYGHTLGNALRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAADIQTPHDVEI
INPDHVIANLSQGGKLDMQIKVEKGRGYVPGNVRRYGDESTKSIGRIVLDASFSPIKRVS
YTVESARVEQRTDLDKLVLEIETNGAIAAEDAVRSSAKILVEQLAVFAQLEGGALDVFDQ
PGGQARNNATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRK
SLNEIKEVLASRGLTLGMKLENWPPAGLEKR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaatttgctgaaacccaagacaattaacgtagaacagctgggccacaatcgc
gccaaggtagagctggagccgtttgaacgcggctacgggcacacgctgggcaatgcgctg
cgtcgtgttctgctgtcctcgatggtgggttatgcagcgacggaagtgaccattgcaggt
gtgctgcacgagtactcgtctatcgacggcgtccaggaagatgtggtcaacatcttgctg
aacctcaagggcgtggtgttcaagctccacaaccgtgacgaagtgacgctgagcctgcgc
aaggatggcgaaggcgtagtgacggcagctgacattcagacgcctcacgatgtagaaatc
atcaaccctgatcatgtcatcgccaacctgtcgcaaggcggcaagctggacatgcagatc
aaggtggaaaaaggccgtggctatgtgcccggtaacgtgcgccgctacggtgacgagtcg
accaagtcgatcggccgcattgtgctggacgcatcgttctcgccgatcaagcgcgtcagc
tacacggtcgaatccgcccgtgtggagcagcgtaccgatctggacaagctggttctcgag
atcgaaaccaacggcgccatcgctgcagaagatgcagtgcgctcgtcggccaagatcctg
gtggaacagctcgccgtgtttgcgcagctcgaaggcggcgcattggatgtgttcgaccag
ccaggcggccaggcgcgcaacaacgccacgttcgacccgatcctgctgcgtcctgtggac
gagctggagttgaccgtgcgttctgccaactgcctgaaggccgaaaacatctactacatc
ggtgacctgatccagcgcaccgaaaatgagttgctcaagaccccgaatctgggtcgcaag
tcgctcaacgagatcaaggaagttctggcttcccgtggtctgaccctgggtatgaagctt
gaaaactggccaccagccggtttggaaaagcgttaa
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