Commensalibacter melissae ESL0284: GN303_04115
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Entry
GN303_04115 CDS
T06375
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
comm
Commensalibacter melissae ESL0284
Pathway
comm03030
DNA replication
comm03430
Mismatch repair
comm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GN303_04115 (dnaE)
03430 Mismatch repair
GN303_04115 (dnaE)
03440 Homologous recombination
GN303_04115 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comm03032
]
GN303_04115 (dnaE)
03400 DNA repair and recombination proteins [BR:
comm03400
]
GN303_04115 (dnaE)
Enzymes [BR:
comm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GN303_04115 (dnaE)
DNA replication proteins [BR:
comm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GN303_04115 (dnaE)
DNA repair and recombination proteins [BR:
comm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GN303_04115 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGT68486
LinkDB
All DBs
Position
921939..925370
Genome browser
AA seq
1143 aa
AA seq
DB search
MSLASFIHLRNHSAYSLSQGAIRIPQMVKLAKTMNMPAIAITDTGNLFGALEFSKTCVDA
GIQPIIGSQIGIPVFGEQPRHITNWPIVLLAQNEIGLLNLQFLSSEGFLKGDPSDPFVNV
DTICEHSEGLILLTGGTRGPIFQLLSEGQEKHASMLLEQFAKAFPGRLAVELQRHNLAEE
KSVEPGLINLADRYGLPLVATNECFFPTPELYEAHDALICIAQGCTVDMQDRWKVTPEHW
FKPPEMMCALFSDLPEACGNTIEIAKRCAVKIETRKPMLPHSRKIKAGTTAEDTLEQMAK
SGLEKRLISICDLTQDHRQKYVDRLDYEINIIKNMGFSGYFLIVADFIQWAKEHDIPVGP
GRGSGAGSLVAWALTITDLDPLRFNLLFERFLNPERVSMPDFDIDFCQDRRDEVIEYVRQ
AYGTNQVAQIITFGKLAARAAVRDVGRVLGFPFGMVNKVAELIPNNPAHPVTLKQAIETE
PRLQEMQATDENIHRLLQVALQLEGLYRHAGTHAAGVVIGDRPLVELVPLYRDPKSDMLV
TQYNMKFVEQVGLVKFDFLGLTTLTILQRAVKMLEKLGQHIDLSKIPLDDTLTYEMLSRG
ESGGVFQFEGAGMRDVLRQMQPSRIEDLIAAVALYRPGPMANIPDYCRRKHGEEWQSPHE
KIRDILEETYGIMVYQEQVMQIAQRLANYSLGGADLLRRAMGKKIRSEMDKQREIFTEGA
TKNGIDRQKAIEIFDLMARFADYGFNKSHAAAYALVSYQTAWMKANYPVAFFAACMSLAR
EKTDKLAILRQEAKRIGISVLPPDINKSGADFEIEKKPDGSLAIRYALAAVKRAGFSAME
ALVHDRDGRDFKNLADFAERIDYQNLNKGQLENLAKAGVFDSIENNRHMVFASAEVILRR
AHARKEEKASGQIGLFQNATAQMAEPLKINSVAEWPEIERLTLEAEAIGYHMTAHPLDSF
RALLIKLGIQPINNLETIARSGEGRIKLAGCILNCKERPTRKGTKMAWVGLSDKTGACEI
TFFSESLNRFRDLLVTGKMVIVTVDLRLDAENLRITANHVEDLETAISGLVKELKIWIDD
VQAVETISKLLENTQKGNGKIILIPNLVQQQEVEILLPGYYNVSPVLAQHIKVINGVEKV
DQF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgcctcttttatccatcttcgtaatcattctgcatattcactaagtcagggg
gctattcgcatacctcaaatggttaagctggccaagacaatgaacatgccagctatcgca
attacggatacaggaaatctgtttggagcattggaattttcaaaaacctgtgttgatgca
ggcatacagccgattattggatcccagatcggtattcccgtttttggtgagcaaccgcgt
catattacaaattggccaattgttttgttggctcaaaatgaaattggattgttgaattta
caatttctttcatcagaaggttttctaaaaggagatccatcggatccctttgtcaatgta
gatacaatatgtgaacattcagagggtttgattcttttaactggtggaacacgcggacct
atatttcaattattatctgaaggtcaggaaaagcatgcatctatgttgcttgaacagttt
gcaaaagcttttccagggcgtttggctgttgaattgcaacgtcataatctggctgaggaa
aaatcggttgagccaggtttaattaatctggcagatcggtatggcttaccccttgtagca
acaaatgaatgtttttttccgactcctgaattgtacgaggcgcacgatgcgctaatttgt
attgcgcagggatgtactgttgatatgcaggatcgttggaaagttacacctgaacactgg
ttcaagccaccggaaatgatgtgcgctctgttttcggatcttcctgaagcatgcggtaac
acgattgaaatcgcaaaacggtgtgcagttaaaattgaaaccagaaaacctatgctgcca
catagtagaaaaataaaggcggggacaacggccgaggatacgcttgaacaaatggcaaaa
tcaggtctggaaaaacgtttgatatccatttgcgatcttacacaagatcatcgccagaaa
tatgtagatcgtcttgattacgaaataaatattatcaagaatatgggcttttcaggttat
tttcttatagttgctgattttattcaatgggccaaggaacatgatattcctgtcggaccg
ggaaggggatctggggcaggatccttggtggcctgggcattgacgattactgatttggat
cctttgcgctttaatttgctgtttgagcgctttttaaatcctgaacgtgtttcaatgccg
gattttgatatcgatttttgtcaagaccggcgagatgaagtcattgaatatgtaagacaa
gcctatggaaccaaccaggtagcacagattataacttttggaaaattggctgcgcgtgct
gctgttcgtgatgttggtcgtgttcttggatttcctttcggaatggtcaataaggttgct
gaactcataccaaacaatcccgcccatccagttaccttgaaacaggccattgaaactgaa
cctagattacaggaaatgcaggcaacagatgaaaatatacatcgtcttttacaagtggct
ttgcagttggagggattataccgacatgcaggtacgcatgcagcgggtgtggtcataggg
gaccgtccgctggttgaacttgtgccgctttatcgtgatccgaaaagtgatatgcttgtt
acgcaatataatatgaaatttgtcgaacaggttgggttggttaaatttgactttttagga
ttaaccaccctgacgattttgcagcgagctgttaaaatgctggaaaagttgggacaacat
attgatctgtcgaaaattccgcttgatgataccctgacttatgaaatgttgagtcgaggt
gaatccggaggcgtttttcaatttgaaggcgccgggatgcgtgatgttttgcgtcaaatg
cagcccagtcgtatagaggatctgattgccgctgtcgctttgtaccgaccaggcccgatg
gccaatattcccgattattgtcgacgtaagcacggagaggaatggcaatcaccgcatgaa
aaaataagggatattcttgaagagacttatggcatcatggtctatcaagaacaggtcatg
caaattgcccagagattggctaattatagtcttggaggggcggatctcttacgtcgagca
atgggtaagaaaattcgttccgaaatggataagcagcgtgagatttttactgaaggtgca
actaaaaatggtattgatcggcaaaaagcgatagagatatttgatttgatggcgcggttt
gctgattatgggttcaataaatcccacgctgctgcttatgctctggtttcttatcagaca
gcatggatgaaagcgaattatccagtggctttttttgccgcatgtatgtcactggcacga
gaaaaaacggataaattagccattcttcgacaagaggcgaaaagaattggtatttctgtc
ttgcctcctgatatcaacaaatccggtgctgattttgaaattgaaaaaaaacctgatggc
agtttggctatacgctatgcattagctgcagttaaaagagcgggttttagcgctatggaa
gccttggttcatgatcgggatggtcgagatttcaaaaatcttgcagattttgccgaacgc
attgattatcagaatttaaataagggccaacttgaaaatcttgccaaggcgggtgttttt
gattcaatcgaaaataacagacatatggtttttgcatcagccgaagtgattttacggaga
gcccatgcacgaaaagaggaaaaagcaagtggccaaattggattatttcaaaatgccacg
gcacaaatggcagaaccgttaaaaattaacagtgtggctgaatggcccgaaattgaacgg
ttaactttggaagctgaagcaataggctatcatatgacagctcacccactagattcgttt
agggctttactgatcaaattgggaatacaaccgataaataatctcgaaacaattgctcgt
tccggagagggaagaattaaacttgctggctgtatattaaattgtaaggaacgtcctacc
cgtaaagggaccaaaatggcttgggttggattatcggataaaactggagcctgtgagata
acttttttttctgaaagtttgaaccgtttccgtgatttgcttgtaactggtaaaatggtt
atcgtaacggttgatttaaggttggatgcagaaaatttgcgtataacggcaaatcacgtg
gaagatcttgaaacagcgatatccggtttggtcaaggaactcaaaatatggattgatgac
gtccaggctgtagaaacaatttcaaaattgctggaaaatacgcagaaaggcaatggtaaa
atcattttaattcccaatcttgttcagcaacaagaggtggaaattttattaccaggatac
tataatgtatcacccgttcttgcacagcatatcaaagtgatcaatggcgttgaaaaagta
gatcaattctaa
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