Commensalibacter melissae ESL0284: GN303_04345
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Entry
GN303_04345 CDS
T06375
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
comm
Commensalibacter melissae ESL0284
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comm03032
]
GN303_04345 (gyrB)
03400 DNA repair and recombination proteins [BR:
comm03400
]
GN303_04345 (gyrB)
Enzymes [BR:
comm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GN303_04345 (gyrB)
DNA replication proteins [BR:
comm03032
]
Prokaryotic type
DNA Topoisomerases
GN303_04345 (gyrB)
DNA repair and recombination proteins [BR:
comm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GN303_04345 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Motif
Other DBs
NCBI-ProteinID:
QGT68530
LinkDB
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Position
complement(989902..992361)
Genome browser
AA seq
819 aa
AA seq
DB search
MVNTNDNSIHSSHLNNDSDNEYDASSISVLKGLEAVRKRPGMYIGDTDDGSGLHHMVFEI
VDNAVDEAQAGFADQCILTLCKDGSIRVRDNGRGIPTDIHPEEGISAAEVVLTKLHAGGK
FNQNSYKVSGGLHGVGAAVVNALSEWMEVRIWRNGKEYFIRFENGETVQSLTEKGSSDEP
TGTEVTFKPSKEIFTHIVFEFGILTRRLRELAFLNSGMEIIVTDEREDEVIKEEFHYEGG
LSEFVKWLTKSKNNLIDPITGSFYNEKTNIKVECSLVWNDTYNEHVLCFTNNIPQKDGGT
HLAGFRQSLTRIVGKYADEVLNNNKKGSLALIGDDMREGLTAILSVKVPDPKFSSQTKDK
LVSSEVQPAVQNSISDMLGHWFETHPKEAKLIISKAFDAASAREAARKARELTRRKGVLD
VSSLPGKLADCQEKDPAQSEIFIVEGDSAGGTAKQGRDRRFQAILPLKGKILNVERARFD
RMLNSAEIGTLITALGTGIGRGDVEQGGFSLEKLRYHKIVIMTDADVDGSHIRTLLLTFF
FRQMPELIEKGYVYIAQPPLYRAKRGNDERYLKNDEALEDYLLKKAINNTALYLADGTEL
RENELENHVKDYSSILHRLRFFEKYAPLWILEQAVMCGVLNEDNMNDPKCRQELQDRLDS
LSAKSERGWQISDENGIKIHRVVRGVKESYSIPLSIIKSKNAAWINQHRQKLITDFNEPA
NLSIDKKDEKVSGPSSVYEFLMNNGKKGLAINRFKGLGEMNDDQLWNTTLDPATRTLLQV
KVGDLENADEIFTTLMGDVVEPRRDFIVDNALTVANLDI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggttaatactaacgataattcaattcattcatctcatttaaataatgatagtgataat
gaatatgatgcctcttcaatttctgtattaaaagggctggaggcagttaggaaaagaccc
ggcatgtatattggagatacagatgatggatccggattgcatcatatggtatttgaaatc
gttgacaatgccgttgatgaagcccaagccggatttgccgatcagtgtatattaacgtta
tgcaaagatggcagcataagggtcagggacaacggtcgtggcatacccactgatattcat
cctgaagagggaataagtgctgctgaggtagtgttgacaaaattgcatgcagggggaaaa
tttaatcagaattcctataaggtttcaggtgggctccatggggtgggtgcagcagttgtc
aatgcgttgtctgaatggatggaagtacgtatctggcgaaatggtaaggaatattttatc
cgtttcgaaaatggtgaaacagttcaatccttaacggaaaaaggatcaagtgatgaaccg
actggtactgaagtcacctttaaaccaagtaaagaaatttttacgcatattgtatttgaa
tttggaatattaactcgccgtctacgtgaactggcctttttgaattcaggtatggaaata
atcgttacagatgaacgtgaagatgaagttataaaggaagaattccattacgagggtggt
ctaagtgaatttgtcaaatggttaactaaatcgaaaaataaccttattgatcctattacc
ggtagtttctataacgaaaaaaccaacattaaagtggaatgttccttggtatggaacgat
acctataatgagcatgtattatgtttcacaaacaatattccccaaaaggatggtggaact
catctcgcaggttttcgtcaatccctaacacgtatagtgggaaaatatgcggatgaagtt
ttaaataataataaaaaaggatcccttgcattaataggagatgatatgcgtgagggattg
accgccatattatctgtaaaagttccagatcctaaattttcatctcaaacaaaagataaa
cttgtatcctcggaagttcaacccgctgttcagaattcaatatccgatatgcttggtcat
tggtttgaaacccatcctaaagaggcaaaactaatcatttccaaagcgtttgatgctgct
tcagctcgtgaagcagcacgtaaagccagagaacttacccgaagaaaaggcgttctggac
gtttcttccttacccggtaaattagctgactgtcaggaaaaagatcctgcacaatcggaa
atctttattgttgagggagattcagctggtggtactgcaaaacagggaagggatcgccgt
tttcaagcaattttgccactaaaaggcaaaatcttgaatgttgaacgtgcacgatttgac
agaatgttaaattctgctgaaattggtacgcttataacagcccttggaacaggtattggt
agaggagatgttgaacaaggtggcttttctcttgaaaagttaagataccacaaaattgtt
attatgacagatgcggatgtggatggatcacatatacgtacattattattaactttcttt
ttccgtcagatgcctgaactgattgaaaaaggatacgtttatattgcgcaacccccacta
tatagagcaaaaagaggtaatgacgaacgatatttaaaaaatgatgaagcgcttgaagat
tatctattgaaaaaagcgataaataatacagctttgtacttggccgatggaacagagctt
agggaaaatgagcttgagaatcatgtaaaagattattcatctatacttcatcgtttgaga
ttttttgaaaaatatgcacctttatggattctcgaacaagcggtcatgtgcggtgtttta
aacgaagataatatgaatgatccaaaatgtcgccaggaattacaagatcgacttgacagt
ttatcggcaaaatcagaaagaggatggcaaatcagtgatgaaaatggaataaaaattcat
cgtgtagtgagaggtgtcaaggaatcttattctatacctctatccattattaaaagtaaa
aatgcagcttggattaatcagcacaggcaaaaattaatcaccgattttaatgaacctgca
aacttgtccattgataaaaaagatgaaaaagttagcggtccatcttcagtatatgaattt
ctaatgaataacggaaaaaaaggtttggccattaatcgttttaaagggcttggtgaaatg
aatgatgatcagctttggaatacaactcttgatcctgctacacgaactctattgcaggta
aaagtgggtgatttggaaaatgcagatgaaattttcacaacattgatgggtgatgttgtg
gaaccaagaagagattttattgttgataatgcgttgaccgttgcaaaccttgatatttga
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