Commensalibacter melissae ESL0284: GN303_04860
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Entry
GN303_04860 CDS
T06375
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
comm
Commensalibacter melissae ESL0284
Pathway
comm03420
Nucleotide excision repair
comm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GN303_04860
03430 Mismatch repair
GN303_04860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
comm03400
]
GN303_04860
Enzymes [BR:
comm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GN303_04860
DNA repair and recombination proteins [BR:
comm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GN303_04860
MMR (mismatch excision repair)
Other MMR factors
GN303_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
AAA_16
Arm_4
Motif
Other DBs
NCBI-ProteinID:
QGT68628
LinkDB
All DBs
Position
1097870..1100083
Genome browser
AA seq
737 aa
AA seq
DB search
MTQYLSQLNETQKKAVETTEGPILVLAGAGTGKTRVLTSRFAHILLSGKAYPNQILAVTF
TNKASREMSERIASLINKPVEGLWLGSFHKICARMLRQNATLVGLTSNFTILDTDDQLRL
IKQITPAYSIDTKRVSPQLILGIIQFWKDKGYSPDNLPNDEINKSGNSLIKTIYAHYQKR
LREINACDFGDLMLHMFNIFSQHQHILEKYQRYFTYIMVDEYQDTNMIQYLWLKLLAQKN
GQEANICCVGDDDQSIYSWRGADITNILRFERDFPGAKIIRLENNYRSTSSILGAASGLI
SFNSQRLGKTLHAANATVEGEKIKILSTYDSDEEARIICKNIIDFHKKEQQFGDMAILMR
TSSQTRPFEECMIKLGIPYKIISGVRFYERAEIRDVIAYMRTVAQPSDDLAFERIINVPK
RGIGKAALQKLHLLSRESNISLTMAAQQALNQGIIRGKVASELNQLILQLEMARSTNEKA
GHLKAIDDLIHHCGYIEMWQQNKSVESDGRLENIRELFRAMSEFQSLYEFLEHISLIMDN
DELSGDDKVNLMTLHAAKGLEFDTVFLPGWEEGLFPSQRTLDENGLNGLEEERRLAYVGI
TRARRNLVISYAANRQIYGNWQSAIPSRFIEELPNQFIVNPSIRINRNHSNPNYFDNLNF
GKKQKGTRDTISFGNIFTPNKQRQNLPKSKNIPVGARVFHQKFGYGTVLKTEQNKLEINF
DKTGIKNVIDSFVTETS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatatctaagccaacttaacgaaacgcaaaaaaaagctgttgaaacaacagaa
ggtcctattctagtgctggctggtgccggaaccggtaaaactcgtgttttaacatcacgt
tttgcccatattctcctttcaggaaaagcgtatcccaatcagattttagcggtgactttt
accaataaagcttcaagagaaatgagcgaaagaattgccagcctcataaataaaccagtc
gagggattatggttgggaagttttcataaaatatgtgcaaggatgttaaggcaaaatgct
acacttgtcggattaacctctaatttcaccattctggacacagatgatcaattacgccta
atcaagcaaattacacccgcttattcaatcgacacaaaaagagtatccccacagttaatt
cttggtataatccagttctggaaagacaagggttactcaccggataatttgcctaatgat
gaaataaataaatccggaaattccctaatcaagacaatttatgcccattatcaaaaacgc
ctgcgggaaattaacgcatgtgattttggcgatcttatgctgcacatgtttaatattttt
agccagcatcaacatatcttggaaaaatatcagcgttattttacgtatattatggttgat
gaatatcaagacaccaatatgatacaatatttgtggttaaaattattagcccaaaaaaat
ggacaagaagccaatatttgctgtgtaggagatgacgatcaatccatatattcttggcgt
ggggcagatataaccaatattttgagatttgaaagagattttccaggagctaaaattatc
cgtttagaaaataattatcgttcaacctcttctatccttggtgccgcatcaggcttgata
tcatttaactcgcaacgattgggaaaaactcttcacgctgccaatgccaccgttgaaggg
gaaaaaatcaaaattctctcaacctatgattccgatgaagaggcaagaatcatttgtaaa
aatattattgattttcacaaaaaagaacaacaatttggcgatatggcaatcctgatgcgc
accagttcccaaacccgtccttttgaggaatgcatgattaaattgggaataccctataaa
atcattagcggggtaagattttacgaacgtgctgaaatacgcgatgtcatcgcttacatg
cgcactgtcgcccagccgtctgatgatttggcatttgaaagaatcattaatgttccgaaa
cgcggaattggcaaagccgcccttcagaaattgcatctgctttcccgagagtccaatatt
tccctaacgatggcagcacaacaagcattaaatcagggaataatcaggggtaaggtagcg
agtgaactaaatcaactgatacttcaacttgaaatggcaagatccacgaatgaaaaagct
ggtcatctaaaggcgattgatgacctgattcatcattgcggctatattgagatgtggcag
caaaacaagtctgttgaatcagacggtagacttgaaaacatcagggaacttttccgggcg
atgtccgagtttcaatctttgtatgaattcttggaacatatctctcttataatggataat
gatgaactgagtggagatgacaaggtcaatttaatgacacttcacgccgccaagggcctt
gaatttgatactgtttttttgccgggatgggaggaaggcctttttccctcacaacgcaca
cttgatgaaaatggattgaatggcttggaagaggaaagacgtttggcttatgttggcatt
acccgtgccaggcgaaatctggtgatatcctatgccgcaaaccgccagatttatggaaac
tggcaatcagcaattcccagccgtttcattgaagaattacccaaccagtttattgtaaat
ccgtcaatcagaatcaatagaaaccatagtaatccaaattattttgataatttgaatttt
ggaaaaaaacagaaaggaacccgagacaccatttcttttggaaatatttttacaccgaat
aaacaacgtcaaaatttgccaaaatctaaaaatattcctgtaggtgcccgtgtgtttcat
caaaaattcggttatggaactgtattaaagactgaacagaataaacttgaaatcaatttc
gataaaaccggaattaaaaacgttatagacagctttgtgacggaaacatcatga
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