Commensalibacter melissae ESL0284: GN303_05230
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Entry
GN303_05230 CDS
T06375
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
comm
Commensalibacter melissae ESL0284
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
comm03016
]
GN303_05230
Enzymes [BR:
comm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GN303_05230
Transfer RNA biogenesis [BR:
comm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GN303_05230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Galanin
Motif
Other DBs
NCBI-ProteinID:
QGT68694
LinkDB
All DBs
Position
1184062..1184724
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AA seq
220 aa
AA seq
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MKNNNKQIPDHIHLYQHDIPSGLDLGKIIAIDTETMGLNHDRDRLCLIQLSKGDGQVHIV
QFVPEWLGGKGFNSCPNLKKLLTDPSIAKLMHFARFDVGILQKTFQISMKSVICTKIAAK
LVRTFTDKHGLAVLCRELLDIELSKQQQTSDWGSPTLSIEQLIYAAADVLYLHQLWEILK
VLLIRENRLEIAEACFSFLPTRATLDQLGYLDPDIFDHRG
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacaataaacaaattcccgatcatattcatctttaccagcatgacatacct
tccggactagatcttggaaaaataatcgcaattgatactgagaccatgggattaaatcat
gatcgagaccggctttgtttgattcagttaagcaaaggggatggacaggttcatattgtc
cagtttgtaccggaatggcttggtggtaaagggttcaattcctgccccaatctaaaaaaa
ttacttactgatccctccattgcaaaattaatgcactttgcccgatttgatgtcgggata
ttacaaaaaacctttcaaataagtatgaaatccgtaatttgtacaaaaattgcagctaaa
ttggtcagaacttttacggataaacacggactggctgttctatgcagagaattacttgat
attgaattaagtaaacagcaacaaacttcagattggggttcaccaaccctgagcattgaa
caattgatctatgcagctgcagatgttctttatcttcaccaattgtgggaaatcttgaaa
gttttattaatcagggaaaatcgtttggaaattgcagaagcctgtttttcatttttacca
acaagagccaccctggatcagctcggatatctagatcctgatatattcgatcatcgtggt
taa
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