Commensalibacter melissae ESL0284: GN303_05570
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Entry
GN303_05570 CDS
T06375
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
comm
Commensalibacter melissae ESL0284
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
comm03016
]
GN303_05570 (thpR)
Enzymes [BR:
comm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GN303_05570 (thpR)
Transfer RNA biogenesis [BR:
comm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GN303_05570 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QGT68756
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All DBs
Position
1249965..1250510
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AA seq
181 aa
AA seq
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MRLFIGIDFPDYVTRHLSQLRGSLTYVRWYDPRTYHLTLNFIGEINDYDLLNDLDLTLEK
ISPPSFNLTIDKVNLFQTASNTQILWAGIQPSESLVHLRKKVEQILRQLEIKTQKQKFVP
HITLGKGSCLPQEHIKQWLNHYNLLKIPDIEITHFSLFSSYPGKEQPNYIIEKNYPLSFQ
T
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttatttataggtattgatttcccagattatgtaactcgccatttaagtcaatta
agaggtagtttgacctatgtaagatggtatgaccctaggacctaccacctcacactaaat
tttataggtgaaattaatgactatgatctgttgaatgatcttgatttgacacttgaaaaa
atatcgcctccttcattcaatttgacaattgataaggttaatctatttcaaacagcttcc
aatacccaaatattatgggcggggatccagccttctgagagtctggttcatttacgtaaa
aaagtggaacaaatcttaagacaattagaaatcaaaactcaaaaacaaaaatttgttccc
catattacactggggaaaggttcttgccttcctcaagaacatatcaaacaatggttgaat
cattataacctgttaaaaattcccgatattgaaataacccacttctcattgttcagctcg
tatcctggtaaagagcagcccaattacataattgagaaaaattatccattatcttttcaa
acttaa
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