Commensalibacter melissae ESL0284: GN303_06005
Help
Entry
GN303_06005 CDS
T06375
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
comm
Commensalibacter melissae ESL0284
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comm03032
]
GN303_06005 (topA)
03400 DNA repair and recombination proteins [BR:
comm03400
]
GN303_06005 (topA)
Enzymes [BR:
comm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GN303_06005 (topA)
DNA replication proteins [BR:
comm03032
]
Prokaryotic type
DNA Topoisomerases
GN303_06005 (topA)
DNA repair and recombination proteins [BR:
comm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GN303_06005 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_2
APOBEC_C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QGT68833
LinkDB
All DBs
Position
1354059..1356629
Genome browser
AA seq
856 aa
AA seq
DB search
MTDVIVVESPAKAKTINKYLGNKYTVLASFGHVRDLSPKDGSVRPTENFAMDWETDERGN
KQIKAIAQALKNAKTLYLATDPDREGEAISWHVQSILNEKKLLKNINVERITFNEITKQA
VQYAIQHPRKLDQPLIEAYLARRALDYLVGFTLSPILWRKLPGSRSAGRVQSVALRLVCE
REAEIEIFQSKEYWTIHGTFISSSNKDFTAKLTHLKNKKLEQFDLNTKNLAKEACTYLNN
QQFSVRTIERKKTRRNPSPPFTTSTLQQEASRKLRMSAQNTMRTAQQLYEGIEVKGETVG
LITYMRTDGVQMANEAIQAIRNHINTEYGEKFVPKSPRKYTSKAKNAQEAHEAIRPTHIN
FTPEQISSYLTADQKQLYDLIWKRALASQMESAELDQISITITDEKQENCFKTTGSTITF
EGFLKVYTESFDDTDKDEAENKNNKGSLLPPLREKETLQTKEILPSQHFTQPPPRYSEAS
LVKKMEELGIGRPSTYASILGVLRDRGYVTLENRYFIPQDRGRLVTAFLTSFFKRYVDVD
FTATLEGQLDEISDSKIDWKKVLQDFWNDFSNAIEQTKELKISDVIDALDHDLGSHFFSE
TTDRSDPRKCPACENGKLHLKLGRYGAFIGCTNYPECQYTRKLTLDNADQEDNEILKEGS
KILGNNPENNEVISLRKGPYGLYIQSGEADPENKKIKPKRAAIPNNIDGNTLTLDQAIAL
LSFPKLLGEYPETGEKIEIGLGRFGPYIKMGNIFAALDKNEDILSVGLNRALEVLAKKMA
SIRNLGLHPKDKEPVLLRKGRFGFYIQHKKSVASLPKGDNGDNTTLEDALKLLEEKGKEL
KKTPTKKKKTVKKTKK
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgtcatcgttgttgaatcgcctgccaaggccaaaaccataaataaatatctt
ggaaacaaatacactgttctcgcctctttcgggcatgtccgagatctttctccgaaggat
ggaagtgttaggccgactgaaaattttgccatggattgggaaacggatgaacgtggaaac
aagcagatcaaggcgattgcccaggccttaaaaaatgccaaaacactttatcttgccact
gaccccgatcgtgagggggaagcaatttcctggcatgtccaatccattctgaatgaaaag
aaattacttaaaaatattaatgtcgagcgtattaccttcaatgaaattaccaaacaggca
gttcaatacgctattcaacatccccggaaactggaccaacctttgattgaagcatatctt
gcacgacgtgcacttgattatctggtaggctttacattatcaccaattttatggcggaaa
ttacctggatcccgaagtgcaggacgagtccaatctgttgccttgcgtcttgtatgcgaa
cgtgaagctgaaatcgagatttttcaatccaaagaatattggaccattcatggcactttt
atctcttcatccaataaggatttcacggcaaaacttacccatttaaaaaacaaaaaactt
gaacaatttgatctaaatacgaaaaatctggcaaaagaggcttgtacatatttaaataat
caacagtttagcgttcgtaccatagagcgaaaaaaaacaagaaggaatccatcccccccc
tttaccacctcgacattacagcaggaagcatcaagaaaattaagaatgagcgcacaaaac
acgatgcgtaccgcacaacaactttatgaaggaattgaagtcaagggggaaaccgttggt
ttgattacctatatgagaaccgatggagtacaaatggccaatgaagcaattcaggccatt
cgtaatcatatcaataccgaatatggcgaaaaatttgtaccaaaatcaccacgcaaatac
acaagtaaggcaaaaaacgcccaagaggcacatgaagccatacgacctacacatatcaat
ttcactcctgaacaaatcagttcttatttaacagctgatcagaaacaactttatgatctt
atctggaaaagagctcttgccagtcagatggaatccgcagaacttgatcaaatttccata
acaataacagatgaaaagcaggaaaattgctttaaaacaacgggatcaacaataacattt
gagggtttcttaaaagtttatacagaaagttttgatgatacagataaagatgaggcggaa
aataaaaacaacaaagggtcactcctaccccccttaagagaaaaagagactcttcaaacc
aaagaaattttgcctagtcagcattttactcaacctcctccacgctatagtgaagcttca
cttgttaaaaagatggaggaactgggtattggtcgtccatctacttatgcatccattctc
ggggttttacgtgacagaggttatgttactcttgaaaatcgttattttattcctcaggat
cgtggacgtttggttactgcttttctaacatctttctttaaacgttacgttgatgtcgat
tttaccgccacgttagagggacaacttgatgaaatttccgatagtaaaatagattggaaa
aaagttttacaggatttttggaacgatttttccaatgccatcgagcaaacaaaagaactg
aaaatctctgatgttattgatgcgcttgatcatgatcttggctctcatttcttttccgaa
acaacggacaggtccgaccccagaaaatgtcctgcctgtgaaaatggcaaacttcatcta
aaactgggtcgctatggggcgtttataggatgtaccaactatcctgaatgtcaatatact
agaaaattaactctggataatgctgatcaagaagataatgagattttaaaagaaggcagc
aaaatccttggaaataatccagaaaataatgaagtaatctcacttcgtaaaggaccttac
ggattatatatacaatctggtgaggctgatcctgaaaataaaaagatcaaacccaaacgt
gccgctattccaaataatattgatggaaatacacttaccctggatcaggccattgcccta
ttatcttttccaaaattacttggagaatatcctgagacaggtgaaaaaatcgaaatcgga
ttgggacgttttggcccttatatcaaaatgggaaatatttttgccgccttggataaaaat
gaagatattttatcagtaggattgaatcgagccttggaggttcttgcaaaaaaaatggct
tctatccgtaatctggggcttcatccaaaagataaggaacctgttttattaagaaaagga
cgtttcggattttatatacagcataaaaaatctgttgcatccctaccaaaaggagataac
ggagataatacaaccctagaggacgcattgaaacttctcgaagaaaaaggaaaagagtta
aagaaaacgccaacaaaaaagaaaaaaacagtaaaaaaaacaaaaaaataa
DBGET
integrated database retrieval system
