Commensalibacter melissae ESL0284: GN303_07655
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Entry
GN303_07655 CDS
T06375
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
comm
Commensalibacter melissae ESL0284
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
comm03400
]
GN303_07655 (addB)
Enzymes [BR:
comm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GN303_07655 (addB)
DNA repair and recombination proteins [BR:
comm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GN303_07655 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QGT69137
LinkDB
All DBs
Position
complement(1725800..1728841)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSKYITIPFNAVFLDTIAQKWMEEMHSQGGYPCGMVIVPNQRTVKALINSFIKVNKGKPL
LLPKIISIGTIDEAGLSFNSKEELILFPAVHPVKRLSILTSLIIQMNHELGNQIQAGEAW
NLAKSLADLMDEAEWIGCDLKTALSKAVEDEYAQHWQNILKFLSIITEIWPQWLQDNQLM
NPVERVIALLKAQAKSWRNSGCQDPVWVVGFADARPVIVEFLSTVVQLPRGRLIVSGLQE
DLSEESWNALPITHPYAELVKMFSALGIKRSDFQYWDHICVQPICKERISAFQQILLPAD
RLESWLINRRPVHLDQCFLIEPLNQQQEAIAIALMIRDALEIPQKRIALVTPDRNLAMRV
SLELGRWGVIADDSAGEPLYKTAGTVFLNLILQACVEDFTPLSLLSLLKHPFACCGLPAS
LCRDYSRLLEIFILRQFAASGLSVIQAALKRKIEEIKLLDKDTLRTDIAYFFSNSSELVS
LLDRLKQNVQTLLGKTTKYTVGEWVTYLARAAEQLASNQEQNGEDILWKAEEGNALAEHL
RDLIVETEYIKVVTLSEFASIFRASFQGLIVHTRRALQGREVRQLHPRVYIWGLLEARLQ
NVDMVILGGLSEGVWPPSIDSGSWLSRPMREKMGMGLPDIEIGRTAYAFMALCCSIPEVI
LSSPLRQENAPVVQSRWIVRLKAWLKGRKSVIQQHPALLWTKYLDQPDGSPTPMECPSPK
PLPALRPKSISITDVERWIKDPYEIYAKKILNLRKIVGLEEDRSTSIFGLIVHEGLKNVY
ENYSKQWTLSGIEQTLLDVLDKRQDILISYKKWWHARLLKIAHWVYQQEKSRRNSRMLPQ
FYLEKEGHHYFQLTAGIDFTLRGIADRIQLNTDGTVEIYDYKTGVTPACINVKNGLFPQL
PLEAAMAYYGGFDKSLAEHEISKFTYWELKGGIEEGKEIHIDNIQKEGDATNLSERYWQV
LQKLIIAYCDQEQPYLSRPRPHLIKEYVQTLPVFGDYKHLARFLEWGLGTGGS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatatatcacgatcccctttaatgcagtatttttggatacgattgctcaaaaa
tggatggaggaaatgcattctcaagggggttacccgtgtggaatggttattgttcccaat
cagagaaccgtaaaagcgttaattaatagttttattaaagttaataaagggaaaccgctg
cttttacccaaaattatttccattggcactatagatgaggcaggattatcttttaatagc
aaagaggaactgatactttttcccgcagttcatcctgtaaaaagattatcaattctgaca
tcgttaattatacaaatgaatcatgagcttggtaatcaaattcaggctggtgaagcttgg
aacttggctaaatccctggctgatttaatggatgaggcggaatggattggatgtgattta
aagacggctttatcaaaagcggttgaggatgaatatgcacagcactggcaaaatattcta
aaatttctatcaattataaccgagatatggcctcaatggttacaggataatcaattgatg
aatcccgtagaaagggtaatagctcttttaaaagcccaggctaaaagttggcggaattct
ggatgccaggatccagtttgggtggtcggatttgcagatgcaaggcccgttattgttgaa
tttctgtccacggttgttcaattgccacgcggacgtttgattgtttccgggttacaggag
gatttgtcagaggaaagctggaatgctttgcctatcacgcatccctacgccgaacttgtc
aaaatgttttcggcattaggtattaagcgttctgattttcaatactgggatcatatatgt
gttcaaccaatttgtaaagagcgtatatcagcatttcagcaaattttattacctgctgac
cgtttggaaagctggttaataaaccggcgtcctgtacatttggatcaatgttttttaatt
gaaccgctcaatcagcagcaagaggcaatagccattgcgttaatgattcgagatgccctg
gaaattccacagaaaagaattgcacttgttacacctgatcgtaatttggcaatgcgtgtt
tctctggaactgggacggtggggggttatcgcggatgatagtgctggtgaaccactttat
aaaacggccggcacagtctttttaaatttgattttgcaagcttgtgtcgaggattttacc
cctttatctttattatccttacttaaacatccatttgcttgttgtggattgcctgccagt
ttatgccgtgattatagccgtttgctggagatctttattctaagacaatttgcagcctct
ggtttatcagtcattcaagcagcattgaagcggaaaatcgaagaaattaagctgttagat
aaggataccctaagaaccgatatcgcatattttttttccaactcatctgaattggtcagc
ttgctggatcgattgaaacagaatgtgcaaactctgttgggaaaaactacaaaatatacg
gttggcgaatgggtgacgtatttggcaagagctgcggaacagcttgcctctaatcaagaa
cagaatggagaggatattctatggaaggctgaagagggaaatgcacttgccgagcatttg
agagatcttattgttgaaactgaatatataaaggtggttactttatctgaatttgccagc
attttcagggcatcgtttcaaggattaattgttcacacgcgccgtgccctacaagggaga
gaagttagacagcttcatccaagggtatatatctggggattgcttgaagcacggttgcag
aatgttgatatggtaattttagggggattatccgaaggggtatggccaccctccattgat
tctggttcttggctaagccgcccgatgcgtgaaaaaatggggatgggactgccggatatt
gaaataggtcgtacagcctatgcttttatggctttgtgttgttcgataccagaagtgatt
ttgtcttcaccgttaagacaggaaaatgcgccagttgtgcaatcacgttggattgtccgt
cttaaggcgtggttgaaggggcgtaagagtgtgattcagcagcatccggctttgttgtgg
acaaaatatcttgatcaaccagatggatctccaaccccaatggaatgtccttctccgaaa
cctttgccggcgttgcgtccaaaatccatttccataactgatgttgagcgatggataaag
gatccttatgagatttatgcgaaaaaaatacttaatttaagaaaaattgttggtttggag
gaagatcgatcaaccagtatttttgggttgatagttcatgaagggttaaagaatgtttat
gaaaattatagcaaacaatggacgctaagcggaatagagcagactcttttggatgtactg
gataaacgtcaggatatcttaatttcttataaaaaatggtggcatgcacggttattaaaa
attgcccattgggtttaccagcaggaaaagtcacgtcgtaatagtcgaatgcttcctcag
ttttatcttgaaaaagaaggccatcattattttcagttgaccgcaggaattgacttcacc
ttacggggtattgcggatcgaatacagctaaacacggatggaactgtagaaatatatgat
tacaaaacaggtgttacccctgcgtgtataaatgtgaagaacggattgtttccacagtta
cccttggaagcggcaatggcttattatggcgggtttgataaaagtctggctgaacatgaa
atttcaaaatttacatattgggagttaaaggggggaatagaggaaggtaaggaaatccat
atagataatattcaaaaagaaggggatgccacaaatttaagcgaaagatactggcaagtt
cttcaaaagctgattattgcctattgtgaccaggaacagccttatttatcccgtccacgt
cctcatttaataaaagaatatgtacaaaccctgcctgtttttggagattataagcatttg
gctcgttttcttgaatggggattgggaactgggggatcatga
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