Commensalibacter melissae ESL0284: GN303_08230
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Entry
GN303_08230 CDS
T06375
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
comm
Commensalibacter melissae ESL0284
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
comm03016
]
GN303_08230 (truB)
Enzymes [BR:
comm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GN303_08230 (truB)
Transfer RNA biogenesis [BR:
comm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GN303_08230 (truB)
Prokaryotic type
GN303_08230 (truB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QGT69232
LinkDB
All DBs
Position
complement(1844684..1845610)
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AA seq
308 aa
AA seq
DB search
MHTKRKQKLDGWLLVDKPLNVTSAYVVNRVKYAFNACKVGHSGTLDPLATGLLPIAFGQA
TKTIPYIMDKTKVYHFELTFGESRTTDDAEGEVLDHSEFRPGDEQINKALQSFQGEIYQV
PPIYSAVKVQGRRSYDLARQGEKPQLKERLARIDSFRMIERIDKDRAKFEVVSGKGVYMR
SLARDLAVACNTVGYVSELRRLRVGPFDIANAFLLDKLVENGKKGIVSLDMLLPVQTALD
DIPALAMTEEEAESLNFGKSIDLTEIRNRFALDVNSYDGIVRAMKKEHFIGLCHLNNKWL
RPVRIFNI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaaaacgtaaacagaagttggatggatggcttcttgttgataaaccattaaat
gtgacatctgcttacgttgtaaatagggtgaaatatgcttttaatgcctgtaaggtaggg
catagtggtaccttggatccattggcgacagggttgttacccatcgcttttggccaggca
accaaaacaatcccttacattatggataagacaaaagtttatcattttgaacttactttt
ggagaatctcgtacaacggatgatgctgaaggtgaggttcttgaccattcagagttcaga
ccgggtgatgaacaaatcaataaggctttacagtcctttcaaggagaaatatatcaggta
cctcctatttactcagcggtaaaggtgcaaggtagacgttcttatgacttagcacgtcaa
ggggaaaaacctcaactaaaagaacggttggcacgtattgattcttttcgaatgatagaa
cggattgataaagatcgtgcaaagtttgaagttgtttctggtaaaggcgtttatatgcgt
tctttagccagggatttggcggttgcctgtaatacagttggttatgtttctgaattacgc
cgccttcgcgtgggtccatttgatattgcaaatgcttttttactggacaaactcgttgaa
aatggcaaaaaaggaattgtttctttagatatgcttcttcccgttcaaactgcgctggac
gacatcccggctctagctatgactgaagaggaggctgaatccctgaattttggcaaatct
attgatctgaccgagatacggaatcgttttgcactggatgtgaattcatatgatggcatt
gttcgtgcaatgaaaaaggagcattttataggattgtgccatttaaacaataaatggctg
cgtcctgttcgtatttttaatatttaa
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