Cellulophaga omnivescoria: PBN93_00580
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Entry
PBN93_00580 CDS
T08738
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
comn
Cellulophaga omnivescoria
Pathway
comn00280
Valine, leucine and isoleucine degradation
comn00650
Butanoate metabolism
comn00907
Pinene, camphor and geraniol degradation
comn01100
Metabolic pathways
comn01120
Microbial metabolism in diverse environments
comn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PBN93_00580
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PBN93_00580
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PBN93_00580
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PBN93_00580
Enzymes [BR:
comn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
PBN93_00580
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Radical_SAM
DUF2443
Motif
Other DBs
NCBI-ProteinID:
WBU89532
LinkDB
All DBs
Position
complement(130170..131036)
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AA seq
288 aa
AA seq
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MSAKVKITECPRDAMQGIKEFIPTELKVKYIQSLLDCGFDTIDFGSFVSPKAIPQMVDTA
EVLANLDLSRTQSKLLSIVANVRGAQDASKHKEINYLGYPFSISENFQMRNTHKTIAQSV
ETLKEILDIANKADKEVVTYISMGFGNPYGDPWNVEIVGEWTEKLAKMGVNIISLSDTVG
SSTPDVIDYLFSNLIPKYPDVKFGAHLHTTPTKWQEKVAAAYNAGCIRFDGAIQGFGGCP
MAKDDLTGNMPTEKMLSYFTAEKVNTNVNWMVFEAAYNKATELFSKYH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctaaagtaaaaattacggagtgcccaagagatgcaatgcaagggataaaagag
tttatcccaacagagttaaaggtaaaatacatacaatctttattagattgtgggtttgac
actatagactttggaagttttgtttcaccaaaagcaataccgcaaatggtagatacggca
gaggttttagcaaacttagatttgtctagaacacaaagtaaattgttatctatagttgct
aatgtacgtggtgcacaagatgcaagtaagcataaagagataaattacttaggctatcct
ttttcaatatcagaaaactttcagatgcgtaatacgcataaaacaatagcccagtctgta
gaaacacttaaggagattttagatattgcaaataaggcagataaagaggttgttacatac
atatctatgggttttggtaacccctacggagatccttggaatgtagagatagtaggtgaa
tggacagagaaattggcaaaaatgggtgttaatattatttcattgtcagatacagttggc
tcatctacaccagatgttatagattatttgttttctaatttaattccaaaatatccagat
gttaaatttggagcacacttacatactacgcccaccaaatggcaagagaaagttgcagcc
gcttataacgccggttgtataaggtttgatggtgcaatacaaggttttggtggctgccct
atggctaaggacgatttaacaggtaatatgcctaccgaaaaaatgttgtcttattttact
gcagaaaaggtaaataccaatgtaaattggatggtttttgaagctgcctacaataaagct
accgaattgttttctaaatatcattaa
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