Cellulophaga omnivescoria: PBN93_02450
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Entry
PBN93_02450 CDS
T08738
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
comn
Cellulophaga omnivescoria
Pathway
comn03030
DNA replication
comn03430
Mismatch repair
comn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBN93_02450
03430 Mismatch repair
PBN93_02450
03440 Homologous recombination
PBN93_02450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comn03032
]
PBN93_02450
03400 DNA repair and recombination proteins [BR:
comn03400
]
PBN93_02450
Enzymes [BR:
comn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBN93_02450
DNA replication proteins [BR:
comn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBN93_02450
DNA repair and recombination proteins [BR:
comn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBN93_02450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
WBU89889
LinkDB
All DBs
Position
complement(553967..554743)
Genome browser
AA seq
258 aa
AA seq
DB search
MDLKLTRPICFFDLETTGINVAKDRVVEISILKVYPNGNKESKTWLVNPEMHIPDEVVAV
HGISNEKVANEPTFAQLSKEIYAMIKDCDLGGYNSDRFDIPLLAEEMLRAGVDFDMKNTV
SVDVQTIFFKMEKRTLEAAYKFYCNKELTNAHSAAADTNATFEVLKSQLDRYPELDNDIK
KLSEFTTRKKFADFAGFIIIDQDGDPAFSFGKHKGKKVDDVLEKEPGYFGWILNADFPLY
TKKVLTQIKLSKLNNKLS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaattaacacgcccaatttgtttttttgatttagaaacaactggtataaac
gtggctaaagatagagtggtagagatttccattttaaaagtataccctaacggaaataaa
gaaagtaagacgtggctggtaaatccagaaatgcatattccagatgaggtagttgcagta
catggtattagcaatgagaaagttgcaaatgaacctacttttgcacaattatctaaagaa
atttacgcaatgattaaagattgtgacttaggtggttacaattcagataggtttgatatt
cctcttttagcagaagaaatgcttcgggctggagtagattttgatatgaaaaatacagtt
tctgtagatgtgcaaaccatcttttttaagatggagaaaagaacattagaagctgcttat
aaattttattgtaataaagagctcaccaatgcacacagtgcagcggcagatactaatgcc
acttttgaggtcttaaaatcgcaattagatcggtacccagagttagataatgatattaaa
aaattatcagaatttaccactcgtaagaagtttgcagactttgcaggttttataattata
gaccaagatggtgaccctgctttttcttttggtaagcataaaggtaaaaaggtagatgat
gttttagagaaagaaccaggctactttgggtggattttaaatgcagattttccgttgtac
acaaaaaaagtacttactcaaataaaacttagtaagttaaacaataagttaagctaa
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