Cellulophaga omnivescoria: PBN93_03300
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Entry
PBN93_03300 CDS
T08738
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
comn
Cellulophaga omnivescoria
Pathway
comn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PBN93_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
comn03021
]
PBN93_03300
Transcription machinery [BR:
comn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PBN93_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
YonA_C
DUF7443
Motif
Other DBs
NCBI-ProteinID:
WBU90051
LinkDB
All DBs
Position
747088..747951
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQVALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKTFAFLEQAHERKPSAEEIAKELDMTIEDVKQSLKNSGRHV
SMDAPLIDGEDSNLYDVLRSGESPNPDRELLIESLRTEIERALETLTPREADVIRLYFGL
AEQHSMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagcttaaaattacaaaacaggttaccaacagggaaaccgcatcgctagataaa
tatttacaggaaattggtaaagtagacttaattactgccgatgaagaagtagaattagca
cagcgaataaaagcgggagaccaagtagccttagaaaaattaactaaagccaaccttagg
ttcgtagtttctgttgctaagcaataccaaaatcagggtttaacattaccagatttaatt
aatgaaggtaacttaggtcttattaaagctgcgcaacgttttgatgaaactcgtggtttt
aaatttatctcttatgctgtttggtggattcgtcaatctatattacaagcattagcagag
caatctcgtattgtacgtttaccactaaacaaaattgggtctataaataagattaataaa
acatttgcctttttagagcaagcacatgagcgaaagccgtctgcagaggaaattgcaaag
gaattagatatgaccattgaggacgtaaaacagtctttaaaaaactctggtcgtcacgta
tctatggatgccccattaattgatggtgaagattctaacctgtatgatgtattacgtagt
ggtgagtctccaaatccagatagagaattattaatagagtctctacgcactgaaatagaa
agagctttagaaacattaactcctagagaagcagatgtaattcgcttatactttggttta
gcagaacaacattctatgaccttagaggaaataggagaaacttttgacttaactcgagaa
agagtaagacaaattaaagaaaaagctattagaagacttaaacacacttctagaagcaaa
attttaaaaacctatcttggataa
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