Cellulophaga omnivescoria: PBN93_03650
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Entry
PBN93_03650 CDS
T08738
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
comn
Cellulophaga omnivescoria
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
comn03400
]
PBN93_03650
Enzymes [BR:
comn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PBN93_03650
DNA repair and recombination proteins [BR:
comn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PBN93_03650
Prokaryotic type
PBN93_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WBU90112
LinkDB
All DBs
Position
complement(834834..836300)
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AA seq
488 aa
AA seq
DB search
MKKQTINIVWLKRDIRSQDHMPFHKAEQANIPYIIVYLFEPEFINYPDTSLRHLQFVYHS
IKVLNTTLEPFNKNVTVFYADAITAFNFLSDTYDIKNVFSYQESGVLATWLRDKKVKQFF
NNNSINWQEYQRDGILRGIKNRQDWSTQWHKTMHQPVIKNTYNSTEKVEVVNHKYLLPTE
LKNKLKNYPKQYQPAGEINAWRYLKSFAAKRGFKYQKHISKPTESRMSCSRLSPYLAWGN
ISVKQAFQFIGTHPNGTKNSNAFSAMLTRLNWHCHFIQKFEVECTYETDCVNKGYELLEH
PTNEDHIKAWKTGTTGYPLVDACMRAVAETGWINFRMRAMLVSFLTLNLDQDWREGTYHL
ARLFLDYEPGIHYPQFQMQAGTTGVNTVRLYNPVKNSLEHDPEGLFIKKWIPELANVPVS
YIHEPWKMSLMEQTFCGVIIGEDYPMPIVDLQTSAKAARDKIWGHKKHPAVENEKDRILN
THVKPRKK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagcaaaccataaatatagtttggttaaaaagagatattcgttctcaggaccat
atgccttttcataaagcagagcaggctaatataccttacataattgtttatttatttgaa
ccagaatttattaattatccagatactagtttaaggcatttacagtttgtttatcactct
ataaaagtactaaatactactttagaaccatttaacaaaaatgttacagtgttttatgca
gacgctattactgcatttaattttttgagtgatacttatgatattaaaaatgtttttagc
tatcaagaaagtggagttttagctacttggctaagagataaaaaggtaaaacaatttttt
aataacaacagtataaattggcaagagtaccaaagagacggtattttacgaggcattaaa
aacagacaagattggagtacccaatggcataaaacaatgcaccaacctgtaattaaaaac
acatataatagtacagagaaggtagaggttgtaaatcataaatatttgctgccaacagag
ttaaaaaataagttaaaaaattacccaaaacagtaccagccagcaggtgaaattaatgcc
tggcgttatttaaaatcttttgccgctaaaagagggtttaagtaccaaaaacacatttct
aaaccaacagaaagtagaatgtcttgtagtaggctttctccttatttagcgtggggtaat
attagtgtaaagcaagcttttcagtttatagggacgcaccctaatggcacaaaaaatagt
aatgcgttttctgcaatgttaacaaggctaaattggcattgccattttattcaaaagttt
gaggtagaatgtacttatgagactgactgtgtaaataaagggtatgaacttttagagcat
cctacaaatgaagatcatattaaggcttggaaaactggcactacaggctaccctctagta
gatgcttgtatgcgagcagttgcagaaacagggtggataaactttagaatgcgtgctatg
ttagtttcatttttaactttaaatctagatcaagattggcgtgaaggtacataccatttg
gcgcgtttatttttagattatgagcctggtatacattatcctcagtttcaaatgcaagca
ggtacaacaggtgttaatacagtacgcttgtacaacccagtaaaaaactcactggagcac
gacccagaaggattgtttataaaaaagtggattccagaattagctaacgtacctgtaagt
tatattcacgagccctggaaaatgagtttaatggagcaaacattttgtggtgtaattata
ggtgaagattacccgatgcctattgtagatttacaaacaagtgctaaggctgccagagat
aaaatttggggacataaaaagcaccctgctgtagagaatgaaaaagatcgtatattaaat
acacacgtaaagcccagaaaaaaataa
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