Cellulophaga omnivescoria: PBN93_04345
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Entry
PBN93_04345 CDS
T08738
Name
(GenBank) AAA family ATPase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
comn
Cellulophaga omnivescoria
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comn03032
]
PBN93_04345
03029 Mitochondrial biogenesis [BR:
comn03029
]
PBN93_04345
Enzymes [BR:
comn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PBN93_04345
DNA replication proteins [BR:
comn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
PBN93_04345
Mitochondrial biogenesis [BR:
comn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
PBN93_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
HTH_40
AAA_19
AAA_30
Pif1_2B_dom
AAA_22
AAA_24
Viral_helicase1
SH3_13
DEAD
AAA_5
AAA
SLFN-g3_helicase
AAA_7
NTPase_1
AAA_16
PhoH
AAA_14
T2SSE
Helicase_RecD
nSTAND3
UvrD_C_2
TrwB_AAD_bind
IstB_IS21
Tnp_P_element_C
Sigma54_activ_2
YqeC
Motif
Other DBs
NCBI-ProteinID:
WBU90245
LinkDB
All DBs
Position
complement(983738..985423)
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AA seq
561 aa
AA seq
DB search
MQQQKALALLKSGKNVFLTGSAGTGKTYVLNQYITYLKKRRIPVAITASTGIAATHMNGM
TIHSWAGFGIKEQLTRANLNAMKEKKYLKEHLENAKILIIDEISMLHKKQLDMVDTVLQF
FKENDEPFGGIQVVVCGDFFQLPPIGNQNEKSKDKFAFMSAVWVAAKFNVCYLTEQYRQA
NEDVLNTILNEIRIGKISKKSIEELKKAEQNTFSKDDEPTKLFTHNYDVDQINNEHLQQL
KGKVKRFKATTKGNKKLVETLKKSVLAKEELELKIHTKVMFVRNNQEQGYVNGTLGTIVS
FNDDGFPVVKTAQGKRISVKQENWGVQDETGKVLASLDQIPLRLAWAITVHKCQGMTLDG
ALIDLSKTFEKGQGYVALSRLKNIENLKLLGFNEMALQVDGLAFKADKRFLELSNEADKT
YKLDDLEEDAIKFVVNCGGLTNIKAIEKHAKKIIDKKIKKDSTYDVTLDYFRKKLSIEEI
ADQRGLSSGTIAGHLIKLCKDYPEEDFSFYQPKEQIIKDVEKAKSKQKKGEPVSLKAIFE
ALNKKVDYNDIKLALAFIGRE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaacaaaaagcactagcattattaaaatctggtaaaaatgtatttttaacaggt
tctgcaggtacaggtaaaacatatgttttaaaccagtacattacctatttaaaaaagcgt
agaataccagttgctataacagcatctacaggtattgcggctacgcatatgaatgggatg
accatacattcttgggctggttttggtataaaagaacaacttaccagagccaatctaaat
gctatgaaggagaaaaagtacctgaaagaacatttagaaaatgcaaaaattttaattatt
gatgaaatatctatgctgcataaaaaacagttagatatggtagatactgttttgcaattt
tttaaagagaatgatgagccctttggaggaatacaagttgtagtctgtggcgattttttt
cagttaccaccaattggcaatcaaaatgaaaaaagtaaagataaatttgcgtttatgtct
gccgtttgggttgctgctaaatttaatgtttgttatttaacagaacaatataggcaagca
aatgaagatgttttaaatactattttaaatgaaattagaataggaaaaatatctaaaaaa
agtattgaagaattaaaaaaagcagaacaaaatacgtttagtaaggatgatgagccaacc
aaattgtttacacacaattatgatgtagatcagattaataacgagcatttacaacaatta
aaaggtaaggttaaaagatttaaagctaccactaaaggaaacaaaaaactggtagaaacg
ttaaaaaaatcagtcttagctaaagaagaattagagctaaaaatacataccaaggttatg
tttgtacgcaacaaccaagaacaaggttatgtaaatggtactttaggtactattgttagt
tttaatgatgatggatttcctgttgtaaaaacagcccaaggaaaacgaatttctgtaaag
caggagaattggggtgtacaagatgaaacgggtaaagttttagctagtttagaccaaata
ccattgcgtttggcctgggcaataacggtacataaatgtcagggtatgacgctagatggt
gcgcttatagacttatctaaaacttttgaaaaaggtcagggttatgttgccttatctcgt
ttaaagaatatagaaaacttaaagctattaggttttaatgaaatggctttgcaagtagat
ggtttagcttttaaggcagataaaagatttttagaactatctaatgaagcagacaagaca
tacaagctagatgatttggaagaagatgctattaagtttgtagttaattgtggtggttta
accaatataaaagctatagaaaagcacgctaaaaaaattatagataaaaaaattaaaaaa
gattctacttacgatgttactttagattattttagaaagaaattaagtattgaagaaatt
gcagatcaaagagggctatctagtggaactatagcgggacatttaattaaattatgtaaa
gattatcctgaagaagattttagtttttatcagcctaaagaacaaataattaaagatgta
gaaaaggctaaaagcaagcagaaaaaaggagagcctgtaagtttaaaagctatttttgaa
gccttaaataaaaaagtagattataacgatattaagctggcactagcttttattggtaga
gagtaa
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