Cellulophaga omnivescoria: PBN93_05040
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Entry
PBN93_05040 CDS
T08738
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
comn
Cellulophaga omnivescoria
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comn03032
]
PBN93_05040
03036 Chromosome and associated proteins [BR:
comn03036
]
PBN93_05040
03400 DNA repair and recombination proteins [BR:
comn03400
]
PBN93_05040
DNA replication proteins [BR:
comn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PBN93_05040
Chromosome and associated proteins [BR:
comn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PBN93_05040
DNA repair and recombination proteins [BR:
comn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PBN93_05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WBU90382
LinkDB
All DBs
Position
1125833..1126123
Genome browser
AA seq
96 aa
AA seq
DB search
MTKADIVSKISDKLGIEKGDVQATVETFMEEVKTSLENGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKSNVQVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcagatatcgtatcgaaaatctcagataaactgggtattgaaaaaggagat
gtacaggctactgttgaaacttttatggaagaggttaaaacttcattagaaaatggagat
aatgtttacctaagaggttttggtagttttattattaaaacaagagcagaaaaaactggt
agaaatatttctaaaaatactaccataaaaataccagctcataacatccctgcatttaaa
cctgcaaaggtttttgttgaaggtgttaagagtaacgtacaagtaaaataa
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