Cellulophaga omnivescoria: PBN93_09135
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Entry
PBN93_09135 CDS
T08738
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
comn
Cellulophaga omnivescoria
Pathway
comn03030
DNA replication
comn03410
Base excision repair
comn03420
Nucleotide excision repair
comn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBN93_09135 (polA)
03410 Base excision repair
PBN93_09135 (polA)
03420 Nucleotide excision repair
PBN93_09135 (polA)
03440 Homologous recombination
PBN93_09135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comn03032
]
PBN93_09135 (polA)
03400 DNA repair and recombination proteins [BR:
comn03400
]
PBN93_09135 (polA)
Enzymes [BR:
comn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBN93_09135 (polA)
DNA replication proteins [BR:
comn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PBN93_09135 (polA)
DNA repair and recombination proteins [BR:
comn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PBN93_09135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PBN93_09135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH
RNase_H_2
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WBU88036
LinkDB
All DBs
Position
complement(2054115..2056955)
Genome browser
AA seq
946 aa
AA seq
DB search
MADQKRLFLLDAYALIFRGYYAFIKNPRINSKGLDTSAILGFTNSLLDVIKRERPDHLAV
CFDRGGSVDRVEMFEAYKANRDATPEAIKLAIPYIEDILKAMHIPVVVKEGYEADDIIGT
LAKKAEKENYKVFMVTPDKDFAQLVSENIFMYRPMFGGGYETWGIPEVLKKFEIERPEQV
IDYLGMMGDSVDNIPGLPGVGEKTAKKFLAAYGSMENLLDNTHELKGKMKEKIEANKELG
LLSKKLARIMLDVPVDFNEKEYELDQPDLPKVTEIFEELEFRRLADNLIKTFATETTTKS
EDNTDKPSKKNTKTSTAGAGQFSLFGGGNSASATQVQQELSSRKTSKDIPHIYQSVAPGM
AMKLFLQGLMKQTSVCFDTETTGLNPLTAELVGIAFSWEASKGFYIPFPEDQAQAQELIE
QLRPFFEDENIEKIGQNLKYDIKVLRKYNLIIKGAYFDTMLAHYLINPDMRHNMDVLAET
YLNYTPISITELIGKKGKNQLSMRQVPVEKQTEYAVEDADITYQLASHFRPELKDAKTED
LFNNIEIPLLSVLADMELEGINLDVNFLNSLSEELNTDIKNLETSIYEAAGEEFNIASPK
QLGEILFGKLKLVDKPKKTKTGQYSTAEDVLSYLAQDHEVIKNILEYRGLAKLKSTYIDA
LPDQVEESTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRDENYTLL
AADYSQIELRIIAALSEETTMIEAFKNGEDIHASTASKVFNVPLDQVTREQRSNAKTVNF
GIIYGVSAFGLSNQTDLSRGESKELIDAYYETYPKLKKYMGELVDFARDNGYVQTVLGRR
RYLKDINSRNAVVRSAAERNAVNAPIQGSAADIIKIAMINIHKKLTEGNFKTKMLLQVHD
ELVFDAHKTELEEVRALIKTEMENAYSLAVPLDVEIGTGDNWLEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaaaaaagactttttttactagatgcatatgcacttatttttagaggatat
tatgcgtttataaaaaacccaagaattaactctaaaggattagacacatcagcaatatta
ggttttaccaactccttactagatgttattaaaagagaaagaccagaccatttagctgta
tgttttgaccgcgggggcagtgtagaccgtgtagaaatgtttgaagcctacaaagccaac
cgagatgccacaccagaagccataaaacttgccattccttatatagaagatattttaaaa
gcaatgcacatacctgttgttgtaaaagaagggtatgaagcagatgatattattggaaca
cttgccaaaaaagcagagaaagaaaactacaaagtttttatggttacgccagacaaagac
tttgcacagctagtctcggaaaacatttttatgtatagaccaatgtttggtggcggatat
gaaacttggggaatacccgaagtactaaaaaagtttgaaattgaaagacctgaacaagtt
atagactacttggggatgatgggagactctgtagacaacataccaggattaccgggtgtt
ggtgaaaaaacagccaaaaagtttttagcagcctatggcagtatggaaaacttactagac
aatacccatgagctaaaaggaaaaatgaaagaaaagatagaagcaaataaggaacttggc
ttactatctaaaaaattagctcgtataatgttagatgtccctgtagattttaacgagaaa
gaatatgaactagaccaaccagatttaccaaaagttactgaaatttttgaagaactagaa
tttagaagactagcagacaatcttataaaaacttttgctacagaaacaacaaccaaatct
gaagacaacaccgacaaaccttctaagaaaaacacaaaaacaagtaccgcaggagcaggc
caattttctttatttggaggtgggaacagcgcatctgcaacacaagtacaacaagagttg
tccagcagaaaaacaagtaaagacattccgcacatataccaaagtgttgctccaggaatg
gctatgaaattgtttttacaaggtttaatgaaacaaacatctgtttgttttgacacagaa
acaacaggattaaatccgctaacagcagaattagtaggaattgctttttcatgggaagca
agtaaaggtttttacatccctttcccagaagaccaagcccaagcccaagaattaatagag
caattacgtccgttttttgaagatgagaacattgaaaaaataggtcagaatttaaaatac
gatataaaagtattacgcaaatacaaccttattattaaaggagcatattttgacactatg
ctggctcattacctaataaatcctgatatgagacataatatggatgtattagctgaaaca
tacttaaactacacacctatttctattacagaattaattggcaaaaaaggtaaaaaccaa
ttatctatgcgacaggtacctgtagaaaaacagacagaatacgcagtagaagatgcagat
attacttaccaattagcaagtcactttagaccagaacttaaagacgctaaaacggaagac
ttatttaacaacatagaaattccgctactaagcgttttagccgatatggagctagaagga
ataaacctagatgttaattttttaaactcattatccgaggaactaaatacagatattaaa
aatctagaaactagtatttatgaagccgctggggaagagttcaacattgcatcaccaaaa
caattaggagaaatactttttgggaaactaaaacttgtagacaaacctaaaaaaacaaaa
acaggtcagtattccaccgcagaagatgtactatcataccttgcacaagaccacgaggta
attaaaaacattttagaatacagaggacttgctaagcttaaaagcacatacattgacgca
ttaccagaccaagtagaagaaagtactgggcgtgtacatacagactatatgcaaacagtt
gcagcaacaggaagactaagcagcaacaaccccaacttacaaaatatacctatacgtaca
gaacgcgggaggcaagtacgtaaagcgtttgttcctagagatgaaaactacacactactt
gctgcagattactcacaaatagaactgcgtattattgcagctttaagtgaagaaacaaca
atgatagaagcttttaaaaacggagaagacattcatgcttctacagcttcaaaagtattt
aacgttcctttagaccaagttacaagagagcaacgtagcaacgcaaagacagtaaacttt
ggaattatttacggtgtttctgcttttggactaagcaaccaaacagatttaagcagagga
gaatctaaagagcttatagatgcttattatgaaacctaccctaaacttaaaaaatatatg
ggtgagttggtagattttgcaagagacaacggttacgtgcaaacagttttaggaagacgt
aggtatttaaaagatattaattctagaaatgccgtagtacgtagcgcagcagaacgtaat
gccgttaacgctccaatacaaggtagcgctgcagatattataaaaattgcaatgataaac
attcacaaaaaacttactgaaggcaattttaaaacaaaaatgcttttacaagtacatgat
gaacttgtttttgacgcacataaaacagaactagaagaagtaagagcacttattaaaaca
gaaatggaaaatgcttattcacttgcagttcctttagacgtagagataggaacaggagat
aattggctagaggcacattaa
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