Cellulophaga omnivescoria: PBN93_11940
Help
Entry
PBN93_11940 CDS
T08738
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
comn
Cellulophaga omnivescoria
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_3
Sa_NUDIX
MCM
Radical_SAM_C
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WBU88582
LinkDB
All DBs
Position
2666746..2667909
Genome browser
AA seq
387 aa
AA seq
DB search
MSKILVIEDEAAIRRVLVKILSEESDTYNVEEAEDGLKGIDAIKKNDYDLVLCDIKMPKM
DGVEVLEAARKLKPELAFIMISGHGDLDTAVNTMRLGAFDYISKPPDLNRLLTTVRNALD
RKNLVVENTKLKKKVSKNYQMIGESEGISLIKDMIEKVAPTDARVLITGSNGTGKELVAH
WLHEKSPRSKAPFIEVNCAAIPSELIESELFGHVKGAFTSAVKDRAGKFEAANKGTIFLD
EIGDMSLSAQAKVLRALQESKISRVGTDKDIKVDVRVVAATNKDLKKEIAEGNFREDLYH
RLAVILIKVPALNDRREDIPLLITYFADKISKEQGTAKKVFSDKAVSLLKSYDWTGNIRE
LRNVVERLIILGGQEVTEEDVKLFASK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatattagtaatagaagatgaagctgcaatacgcagggttttggtaaaaatt
ttatcagaagaaagcgatacttataatgttgaagaggcagaagacggtttaaaaggtata
gatgccattaaaaaaaacgattacgatttagttttgtgtgatattaaaatgccaaaaatg
gatggtgtagaggtattagaagctgcgcgtaaattaaaaccagaattggcatttataatg
atttctggtcacggagatttagatactgcagtaaacacaatgcgtttaggtgcttttgat
tatatatctaaaccaccagacttaaataggttgctaacaacagtacgtaatgcattagat
cgtaaaaatttggttgtagaaaatactaaacttaagaaaaaagttagtaaaaactaccaa
atgataggagaaagcgaaggcatatctttaataaaagatatgatagaaaaagtagctcct
acagatgcacgtgttttaattacaggatctaatggtacgggtaaggagttggtagctcat
tggttacatgaaaaaagcccgcgtagtaaagcaccatttatagaggtgaactgtgcagca
ataccatctgaattaatagaaagtgaactttttggtcacgttaaaggagcatttacatct
gcagttaaagatagagctggtaaatttgaagcagcaaataaaggaactatttttttagat
gaaataggtgatatgagtttgtctgcgcaggcaaaagtgttacgtgctttacaagaaagt
aaaatatctagagttggtacagataaagatataaaggttgatgttagggtagtggcagct
acaaataaagatctaaaaaaggaaatagcagaaggtaattttagagaagatttataccat
agacttgcagttatacttataaaagtcccagcgttaaatgatagaagagaagatattcct
ttgttaataacatattttgcagataaaataagtaaagagcaaggaacggctaaaaaagta
ttttctgataaagcagtttcattgttaaaaagttatgactggacaggaaacattagagag
ctacgcaatgttgtagaacgattaattattttaggcggacaagaagttacagaagaagat
gtaaaactatttgcaagtaaataa
DBGET
integrated database retrieval system
