Cellulophaga omnivescoria: PBN93_12190
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Entry
PBN93_12190 CDS
T08738
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
comn
Cellulophaga omnivescoria
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
comn03000
]
PBN93_12190
Transcription factors [BR:
comn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PBN93_12190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_23
HTH_24
HTH_10
HTH_11
HTH_AraC
HTH_3
MarR_2
Phage_terminase
MarR
HTH_38
HTH_7
IF2_N
Sigma70_r4_2
Sigma70_r4
TnsD
HTH_5
HTH_Tnp_ISL3
HTH_AsnC-type
Fe_dep_repress
SpoIIID
HTH_Crp_2
Sigma54_DBD
HTH_28
HTH_IclR
HTH_31
HTH_6
HTH_26
GntR
Cro
HTH_36
NUMOD1
Mga
HTH_29
TetR_N
Xre-like-HTH
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WBU88626
LinkDB
All DBs
Position
complement(2729610..2730647)
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AA seq
345 aa
AA seq
DB search
MKAKITIKDIAKELGVSSSTVSRALKNSPEISEETRKKVKAFADLYHYKPNMLAQKLRNN
KTMVIGVIIPEIVHHFFSRVISGVEKIANGRDYNVMICLSNESYEKEKLNIQMMANGSVD
GLLVSIAKETLEKGNFEHFNELKDYNIPLVLFDRISDKIDCDKVIVDDIGGGYKATKHLL
DVGCKKIAILSTPDHVNVGALRTIGYKRALEEKGIAIDENLIFKVNDNSSITKQISTFMH
NSNLSYDGIVAVNEIYAANVIKIAKEKDLQIPNELCVVGFTDGLISSFSTPSLSTIDQHG
ITIGEHAAELLLDRIQNKTANKEYQRKVISTDLIIRKSSEKNTVL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaaaattaccataaaagacatagcaaaagagttaggtgtgtcttcttctaca
gtatctagagcattaaaaaacagccctgaaataagtgaagaaacacgtaaaaaagttaag
gcctttgcagacttatatcattacaaaccaaatatgcttgcgcaaaaattacgcaataat
aaaacaatggtaattggtgtaattattccagaaattgtacatcattttttttctagagtt
attagtggtgtagaaaaaatagcaaacggtagagattacaatgttatgatatgtttatct
aacgaatcttacgaaaaagaaaaattaaacatacaaatgatggctaacggaagcgtagat
ggcttgcttgtttcaatagctaaagaaaccctagaaaaaggcaattttgaacattttaac
gaattaaaagattacaatattcctttggttttatttgatagaatttctgataaaattgat
tgtgataaagttattgtagatgatattggtggtggttacaaagctaccaaacacttatta
gatgtagggtgtaaaaaaatagccatattatctacaccagaccacgtaaatgttggcgca
ttacgcacaattggctacaaaagagctttagaagagaaaggaattgcaatagacgaaaat
cttatttttaaagtaaacgacaactctagcattaccaaacaaattagcacatttatgcac
aactctaatttaagttatgatggaatagtagctgttaatgaaatttatgctgctaatgtt
ataaaaatagctaaagaaaaagatttacaaattcctaatgagctttgtgttgttggcttt
acagatggattaatatcttcattttcaacaccttcattatctaccatagaccaacacggc
attacaattggcgagcacgctgcagaattattgttagaccgcatacaaaataaaactgct
aataaagaataccaacgtaaagttatttctaccgatttaattattagaaaatcatcagaa
aaaaatacagttttgtaa
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