Cellulophaga omnivescoria: PBN93_12915
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Entry
PBN93_12915 CDS
T08738
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
comn
Cellulophaga omnivescoria
Pathway
comn00541
Biosynthesis of various nucleotide sugars
comn01100
Metabolic pathways
comn01250
Biosynthesis of nucleotide sugars
Module
comn_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PBN93_12915 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
comn01005
]
PBN93_12915 (kdsB)
Enzymes [BR:
comn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
PBN93_12915 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
comn01005
]
Lipid A
PBN93_12915 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
Motif
Other DBs
NCBI-ProteinID:
WBU88765
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Position
2915462..2916190
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AA seq
242 aa
AA seq
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MKIIAMIPARYAASRFPGKLMQNLAGKPVIVRTYETAIKTNLFDDVFVVTDSDTIYKTIT
EAGGKAIMSIKEHECGSDRIAEAVENMDVDIVFNIQGDEPFTPKEGLEELLSVFKNDDKK
EIDLATIMSEMTDENEIKDPNFVKVIVDNRNFALYFSRSPIPYPREKNVGLKYYEHKGVY
AFRKNALMDFYNLPMLPLEASEKIECIRYLEYGKKIKMIVDNTSGIEIDTPEDLERAQAE
WK
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaagattattgcaatgattcctgcacggtatgcagcgtctagatttccgggtaaacta
atgcaaaatttagcaggtaaacccgttattgttagaacctatgaaaccgctataaaaaca
aatttatttgatgatgtttttgtggttacagatagtgacactatttacaagacaataaca
gaggctggtggtaaggctataatgagcattaaggaacacgagtgtggtagtgaccgtata
gcagaggctgtagaaaatatggacgtagatatagtttttaatatacaaggggatgagcct
tttacgcctaaagaagggttggaggaattattatcggtatttaaaaatgatgataaaaaa
gaaatagatcttgctacaattatgtctgaaatgacagatgaaaatgaaattaaagatcca
aactttgtaaaagttatagtagataacagaaattttgcattatacttttctcgttcgcca
attccttaccctagagaaaaaaatgttggactaaaatattacgagcataaaggtgtttat
gcctttagaaaaaatgctcttatggatttttacaatctaccaatgttacctttagaggca
tcagaaaaaatagagtgtattcgttatctagaatatggaaaaaaaattaaaatgattgta
gataatacttctggtatagaaatagatacaccagaggatttagaaagagcacaagcagaa
tggaagtag
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