Cellulophaga omnivescoria: PBN93_13910
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Entry
PBN93_13910 CDS
T08738
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
comn
Cellulophaga omnivescoria
Pathway
comn03030
DNA replication
comn03430
Mismatch repair
comn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBN93_13910 (holA)
03430 Mismatch repair
PBN93_13910 (holA)
03440 Homologous recombination
PBN93_13910 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
comn03032
]
PBN93_13910 (holA)
03400 DNA repair and recombination proteins [BR:
comn03400
]
PBN93_13910 (holA)
Enzymes [BR:
comn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBN93_13910 (holA)
DNA replication proteins [BR:
comn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PBN93_13910 (holA)
DNA repair and recombination proteins [BR:
comn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PBN93_13910 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
UPF0113
Tn7_TnsC_Int
Motif
Other DBs
NCBI-ProteinID:
WBU88957
LinkDB
All DBs
Position
3155011..3156012
Genome browser
AA seq
333 aa
AA seq
DB search
MDEVKKLISDIKNGNVKPIYFLMGEESYYIDKISEYIEKSVLTEEERGFNQMVLYGKDVT
IDDIVSNAKRYPMMAEKQVVVVKEAQHLSRTIDNLASYANNPQLTTVLVICYKYAKLDKR
KKLYKAVQKSGVLFESKSLYENKVADWIMKVLKGGGYTITPVAAQLLVEYLGTSLSKINN
ELEKLKIVITKDTQITPATIEEHIGISKDFNNFELKKAIGERNTLKAARIINYFAQNPKD
NPFVVTVTVLHTYFTQILQYHGLKDHSKSNVAKVLGVNPYFVNEYQTAARNFPMKKVSGI
ISALRDLDLKGKGVGAYNMSQADLLKELLVKVF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtaaaaaaactaatctccgatataaaaaacggaaacgtaaaacctatttat
tttttaatgggagaggagtcttattacattgataagatatctgaatatattgaaaaatct
gtattaacagaagaggagcgcggttttaaccaaatggtgctttatggtaaagatgttact
attgatgatatagtgtctaatgctaagcgctacccaatgatggcagaaaagcaagttgta
gttgtaaaagaagcccagcatttgtctagaactatagataatttggctagttatgctaat
aacccgcagttaacaacagtgttggtcatttgttacaaatatgctaagctagataagcgt
aaaaagttgtacaaagcagtacaaaaaagtggtgtattatttgagagtaaaagtttatac
gaaaataaagttgcagactggataatgaaagttcttaaaggtggtggttatactataacg
ccggttgccgcacaattacttgtagagtatttaggaactagcttaagtaaaattaataat
gagttagaaaaactaaaaattgtaattactaaagacacacaaattacaccagccactatt
gaagagcatataggaattagcaaagattttaataattttgagcttaaaaaagcaataggt
gagcgtaataccttaaaagctgctagaattataaattattttgctcaaaatccaaaagac
aatccttttgtggttacggtaactgttttacatacttattttacacaaatactacaatac
cacggattaaaagaccactctaagagcaatgtggctaaagttttaggagtaaacccttat
tttgttaatgagtaccaaacagctgccagaaattttccaatgaaaaaggtaagcggaatt
atatctgcattacgagatttagatcttaaaggcaaaggtgttggtgcgtataatatgtct
caggctgacttgttaaaagagcttttggtaaaagttttttaa
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