Cellulophaga omnivescoria: PBN93_14695
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Entry
PBN93_14695 CDS
T08738
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
comn
Cellulophaga omnivescoria
Pathway
comn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PBN93_14695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
comn03021
]
PBN93_14695
Transcription machinery [BR:
comn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PBN93_14695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
PgaD
HTH_11
TFIIE_beta
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WBU89109
LinkDB
All DBs
Position
3327994..3328857
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AA seq
287 aa
AA seq
DB search
MRQLKIIKQVTNRESKSLDKYLQDISKIDLITANEEVELAQKIRAGDEAALEKLTNANLR
FVVSVAKQYQNQGLKLPDLINEGNVGLVKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKIKKAFSYLEQTHERPPSAEEIAKELELSVSEVKQSMKNSGRHV
SMDAPFKEGEDSNLYDVIKYGESPNPDEKLMHQSLNTEINRALETLSPREADVVKLYYGI
GDKHSMTLEEIGQIFDLTRERVRQIREKAIRKLKHNSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaactaaagatcatcaaacaggtaaccaacagagaatcaaaatcactagataaa
tacctgcaagatatcagcaaaatagatctaattactgccaatgaagaagtagagttagct
caaaaaatacgtgcaggagacgaagctgcattagaaaaattaacaaacgcaaatttaaga
tttgttgtttctgttgctaaacaatatcaaaatcaaggtttaaaattaccagatttaatt
aacgaaggcaatgtaggtttagttaaagccgctaaaagatttgatgaaactagaggtttt
aagtttatttcttatgctgtttggtggattagacagtctattttacaagccttagcagaa
cagtctagaattgtacgtttaccattaaacaaaattggttctattaataaaattaagaaa
gctttttcttatttagagcaaacacatgaaagaccaccttctgcagaagaaattgcaaaa
gagttagaattatctgttagtgaggtaaaacagtctatgaaaaactctggaagacatgta
tctatggatgcaccttttaaagaaggtgaagattctaacttatatgatgttattaaatac
ggggaatctccaaacccagatgaaaaattaatgcatcaatctttaaatacagaaataaat
agagcattagaaacattatcacctagagaagcagatgttgtaaaactatattacggtatt
ggtgataagcactctatgactttagaagaaattggtcagatttttgacctaacacgtgag
cgcgttaggcaaattagagaaaaggccatacgtaagctaaaacacaactctagaagcaaa
atattaaaaacatatttaggttaa
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