Actibacterium sp. EMB200-NS6: TQ29_00185
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Entry
TQ29_00185 CDS
T04096
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
con
Actibacterium sp. EMB200-NS6
Pathway
con03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
con00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TQ29_00185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
con03021
]
TQ29_00185
03019 Messenger RNA biogenesis [BR:
con03019
]
TQ29_00185
Transcription machinery [BR:
con03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TQ29_00185
Messenger RNA biogenesis [BR:
con03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TQ29_00185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
NACHT
ATPase_2
OB_RNB
AAA
AAA_25
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
ALG88870
LinkDB
All DBs
Position
35340..36611
Genome browser
AA seq
423 aa
AA seq
DB search
MTQDCLNLSDLKAKSPKDLLAMAEELEIENASTMRKGDMMFSILKERAEEGWEISGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPEMIRQHSLRTGDTVEGVMQAPRETERYFAITK
VTQINFEDPEKARHKINFDNLTPLYPDERLKMEIEDPTIKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIANSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDKGDLQKTFVLRRILNPMGTTDAIEFLISKLKQTKSNAEFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagattgcctcaacctgtccgaccttaaggccaagagccccaaggatctcctc
gctatggccgaggagctggagatcgagaacgcctcgaccatgcgcaagggagacatgatg
ttctccatcctcaaggagcgcgcggaagaggggtgggagatttccggcgatggcgtgctc
gaggtgcttcaggacggcttcggtttcctgcgctcgcccgaggcgaactatctgcccggc
cccgatgacatctatgtgtcgcccgagatgatccgccagcacagcctgcgcaccggtgac
acggtcgaaggcgtgatgcaggccccgcgcgagacagagcgctatttcgcgatcaccaag
gtgacgcagatcaatttcgaggatccggaaaaagcccggcacaagatcaacttcgacaac
ctgacgccgctctatcccgacgagcgtctgaagatggaaatcgaggatccgacgatcaag
gaccgttcggcccggatcatcgatctggtcgcgccgatcggcaagggccagcgttcgctc
atcgtggcgccgccgcgcacgggtaagacggttctgcttcagaacatcgccaactcgatc
gagaagaaccacccggaatgctatctgatcgtcctgctgatcgatgaacgccccgaagag
gtgacggacatgcagcgcagcgtgaagggcgaggttatctcctcgaccttcgatgaacct
gcctcgcgccatgtggcggtttccgaaatggtcatcgaaaaggccaaacgcctggtcgag
cacaagcgcgatgtggtgatcctgctcgattcgatcacccgcctgggccgcgcctacaac
accgtcgtgccgtcgtccggcaaggttctgaccggcggcgtcgatgctaacgcgctgcaa
cggcccaagcgtttcttcggtgccgcgcggaatatcgaagagggcggcagcctgaccatc
atcgccaccgcgctgatcgacaccggcagccggatggacgaggtgatctttgaagaattc
aaaggcaccggcaactccgagatcgtgctggaccgcaaggtggccgacaagcgggtgttc
ccggcgatggatatcctcaagtcgggcacccggaaagaagagcttctggtggacaagggc
gatctgcaaaagacctttgttctgcgccggatcctcaacccgatgggcacgacggatgcg
atcgagttcctgatttccaagctgaaacaaaccaaaagcaacgcggaattcttcgactcc
atgaacacctga
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