Actibacterium sp. EMB200-NS6: TQ29_06425
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Entry
TQ29_06425 CDS
T04096
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
con
Actibacterium sp. EMB200-NS6
Pathway
con03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
con00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TQ29_06425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
con03019
]
TQ29_06425
Messenger RNA biogenesis [BR:
con03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TQ29_06425
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ALG89900
LinkDB
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Position
1297411..1299084
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AA seq
557 aa
AA seq
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MSSKNRLIYLPLGGAGEIGMNAYVYGYGPADNERLILVDVGVTFPEMENTPGVDLIFADI
AWLEARADRLEAIFITHAHEDHVGALGLLWPRLKAPVYTRAFTGNIAARKLEEKGQDPSI
IRVVAAYPEKIKAGPFTVSFLPVSHSIPESSGMVIDTPAGRLVHTGDFKLDETPGVGDPF
DPALWAEVAGKGVKALICDSTNVFSPNAGRSESSVGPAIRQLVQKAEGMVVATTFASNIA
RVKTLAEAGRDAGRSVVLLGRAMRRMVEAGVESGVLTDFPTTVPPEDAVSIPRDHLMLIV
TGSQGERRAASAQLSRGKYLGLSMKEGDMFLFSSKTIPGNEKGVIHIVNAFSEMGVDVVD
DAADLYHVSGHANRPDLETVHKIMKPQMVVPMHGEHRHLREHVKLAAENGFAAAIATNGT
MLDLSGKAPRVVGQIEAGRTYLDGSVQIGALDGIVRDRIRLALNGLVMVTLIIDEDDEPL
GEPWVELKGLPETGSSNAALAEVLEGDLAQLIARADDKTLADDDKLEDLLRRRTRQVALQ
EIGRKPEVVVVISRLVA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaagaaccgactgatttacctgcccctcggtggagcgggagagatcgggatg
aatgcctatgtctacggctacgggccggcagacaacgaacggctgatcctggtcgatgtg
ggggtgactttccccgagatggaaaatacccccggcgtcgatctgatcttcgccgatatc
gcctggctggaggcccgtgccgaccggcttgaggcgattttcatcacccatgcccatgaa
gatcacgtgggggccctgggcctgttgtggccgcgcctgaaggcgccggtctatacccgc
gccttcaccggcaatatcgccgcgcgcaagctcgaggaaaaagggcaggatccgtcgatc
atccgggtcgtcgcggcatatcccgaaaagatcaaggcggggccgttcacggtgtcgttc
ctgccggtctcgcactcgatccccgaaagctctggcatggtgatcgatacgccggccggg
cggctggtgcataccggcgacttcaagcttgatgaaacccccggcgtcggtgacccgttc
gatccggccttgtgggccgaggtcgcgggcaagggcgtcaaggcgctgatctgcgattca
accaatgtgttctcgcccaatgcggggcggtcggaatcgtctgtcggcccggcgatccgc
cagcttgtgcaaaaagccgagggcatggtggttgcaaccaccttcgcctccaacatcgcg
cgggtaaagacgctggccgaggccgggcgcgatgccgggcgttcggtggtgctgctgggg
cgggcgatgcgacgcatggtcgaggccggggtggaaagcggcgtgctgaccgatttcccg
acgacggtgccgccagaggatgccgtcagtattccgcgcgatcacctgatgctgatcgtc
accggcagccagggcgaacggcgcgcggcttcggcgcagctttcgcgcggcaaatacctg
ggcctgtcgatgaaagaaggggacatgttcctgttctcgtcaaagaccattccggggaac
gaaaagggcgtgatccatatcgtcaacgcgttttcggaaatgggcgtggatgtggtggat
gacgcggccgatctctatcacgtgtccgggcacgccaaccgcccagatctggagacggtg
cacaagatcatgaagccgcagatggtggtgccgatgcacggcgaacaccggcacctgcgt
gagcatgtcaagctggccgccgaaaacggatttgccgccgccatcgcgaccaacggcacc
atgcttgacctcagcggcaaggcgccgcgcgtcgtcgggcagatcgaggccgggcgcacc
tatctcgatggcagcgttcagatcggcgcgctggatggcatcgtgcgcgaccgtatccgg
ctggcgctgaacgggctggtgatggtcacgctgatcatcgacgaagacgacgagccgctg
ggcgaaccctgggtcgagctgaagggcctgccggaaaccggcagttcgaacgccgcgctg
gccgaggtgctggagggcgatctggcccagttgatcgcacgggccgacgacaagacgctg
gccgatgacgacaagctggaagacctgctgcgccgccgcacccgccaggtggcgctgcag
gagatcgggcgcaagcccgaggtcgtggtggtgatcagccgtctggtggcctga
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