KEGG   Actibacterium sp. EMB200-NS6: TQ29_06425
Entry
TQ29_06425        CDS       T04096                                 
Name
(GenBank) metallo-beta-lactamase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
con  Actibacterium sp. EMB200-NS6
Pathway
con03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:con00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TQ29_06425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:con03019]
    TQ29_06425
Messenger RNA biogenesis [BR:con03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TQ29_06425
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: ALG89900
LinkDB
Position
1297411..1299084
AA seq 557 aa
MSSKNRLIYLPLGGAGEIGMNAYVYGYGPADNERLILVDVGVTFPEMENTPGVDLIFADI
AWLEARADRLEAIFITHAHEDHVGALGLLWPRLKAPVYTRAFTGNIAARKLEEKGQDPSI
IRVVAAYPEKIKAGPFTVSFLPVSHSIPESSGMVIDTPAGRLVHTGDFKLDETPGVGDPF
DPALWAEVAGKGVKALICDSTNVFSPNAGRSESSVGPAIRQLVQKAEGMVVATTFASNIA
RVKTLAEAGRDAGRSVVLLGRAMRRMVEAGVESGVLTDFPTTVPPEDAVSIPRDHLMLIV
TGSQGERRAASAQLSRGKYLGLSMKEGDMFLFSSKTIPGNEKGVIHIVNAFSEMGVDVVD
DAADLYHVSGHANRPDLETVHKIMKPQMVVPMHGEHRHLREHVKLAAENGFAAAIATNGT
MLDLSGKAPRVVGQIEAGRTYLDGSVQIGALDGIVRDRIRLALNGLVMVTLIIDEDDEPL
GEPWVELKGLPETGSSNAALAEVLEGDLAQLIARADDKTLADDDKLEDLLRRRTRQVALQ
EIGRKPEVVVVISRLVA
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgagcagtaagaaccgactgatttacctgcccctcggtggagcgggagagatcgggatg
aatgcctatgtctacggctacgggccggcagacaacgaacggctgatcctggtcgatgtg
ggggtgactttccccgagatggaaaatacccccggcgtcgatctgatcttcgccgatatc
gcctggctggaggcccgtgccgaccggcttgaggcgattttcatcacccatgcccatgaa
gatcacgtgggggccctgggcctgttgtggccgcgcctgaaggcgccggtctatacccgc
gccttcaccggcaatatcgccgcgcgcaagctcgaggaaaaagggcaggatccgtcgatc
atccgggtcgtcgcggcatatcccgaaaagatcaaggcggggccgttcacggtgtcgttc
ctgccggtctcgcactcgatccccgaaagctctggcatggtgatcgatacgccggccggg
cggctggtgcataccggcgacttcaagcttgatgaaacccccggcgtcggtgacccgttc
gatccggccttgtgggccgaggtcgcgggcaagggcgtcaaggcgctgatctgcgattca
accaatgtgttctcgcccaatgcggggcggtcggaatcgtctgtcggcccggcgatccgc
cagcttgtgcaaaaagccgagggcatggtggttgcaaccaccttcgcctccaacatcgcg
cgggtaaagacgctggccgaggccgggcgcgatgccgggcgttcggtggtgctgctgggg
cgggcgatgcgacgcatggtcgaggccggggtggaaagcggcgtgctgaccgatttcccg
acgacggtgccgccagaggatgccgtcagtattccgcgcgatcacctgatgctgatcgtc
accggcagccagggcgaacggcgcgcggcttcggcgcagctttcgcgcggcaaatacctg
ggcctgtcgatgaaagaaggggacatgttcctgttctcgtcaaagaccattccggggaac
gaaaagggcgtgatccatatcgtcaacgcgttttcggaaatgggcgtggatgtggtggat
gacgcggccgatctctatcacgtgtccgggcacgccaaccgcccagatctggagacggtg
cacaagatcatgaagccgcagatggtggtgccgatgcacggcgaacaccggcacctgcgt
gagcatgtcaagctggccgccgaaaacggatttgccgccgccatcgcgaccaacggcacc
atgcttgacctcagcggcaaggcgccgcgcgtcgtcgggcagatcgaggccgggcgcacc
tatctcgatggcagcgttcagatcggcgcgctggatggcatcgtgcgcgaccgtatccgg
ctggcgctgaacgggctggtgatggtcacgctgatcatcgacgaagacgacgagccgctg
ggcgaaccctgggtcgagctgaagggcctgccggaaaccggcagttcgaacgccgcgctg
gccgaggtgctggagggcgatctggcccagttgatcgcacgggccgacgacaagacgctg
gccgatgacgacaagctggaagacctgctgcgccgccgcacccgccaggtggcgctgcag
gagatcgggcgcaagcccgaggtcgtggtggtgatcagccgtctggtggcctga

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