KEGG   Actibacterium sp. EMB200-NS6: TQ29_07680
Entry
TQ29_07680        CDS       T04096                                 
Name
(GenBank) integration host factor subunit alpha
  KO
K04764  integration host factor subunit alpha
Organism
con  Actibacterium sp. EMB200-NS6
Brite
KEGG Orthology (KO) [BR:con00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:con03032]
    TQ29_07680
   03036 Chromosome and associated proteins [BR:con03036]
    TQ29_07680
   03400 DNA repair and recombination proteins [BR:con03400]
    TQ29_07680
DNA replication proteins [BR:con03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    TQ29_07680
Chromosome and associated proteins [BR:con03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    TQ29_07680
DNA repair and recombination proteins [BR:con03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      TQ29_07680
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: ALG90088
LinkDB
Position
complement(1566986..1567288)
AA seq 100 aa
MTGKTLTRMDLSEAVFREVGLSRNESANLVESVLQHMSDALVAGESVKISSFGTFSVREK
AARVGRNPKTGEEVPIHPRRVLTFRPSHLMKDRVAAGNRG
NT seq 303 nt   +upstreamnt  +downstreamnt
atgaccggcaagacattgacgcggatggatttgagcgaagccgtatttcgcgaggtcgga
ttgtcgcgcaacgaatcggcgaatcttgtggaaagcgtgcttcagcacatgtcggacgcg
ctggttgccggtgagtcggtcaagatctcgtctttcggcacgttcagcgtacgcgaaaag
gccgcccgcgtcggccgcaaccccaagacgggcgaagaggttccgattcacccccgccgg
gttctgaccttccgcccctcgcatctgatgaaagatcgcgttgccgccggaaaccggggc
tag

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