Actibacterium sp. EMB200-NS6: TQ29_08410
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Entry
TQ29_08410 CDS
T04096
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
con
Actibacterium sp. EMB200-NS6
Brite
KEGG Orthology (KO) [BR:
con00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
con01002
]
TQ29_08410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
con01011
]
TQ29_08410
Peptidases and inhibitors [BR:
con01002
]
Cysteine peptidases
Family C82
TQ29_08410
Peptidoglycan biosynthesis and degradation proteins [BR:
con01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TQ29_08410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ALG91881
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Position
1713657..1715210
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AA seq
517 aa
AA seq
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MVSSGGLAVSAVAQSAGFKIAVAESAASDKDLAEFYRARDYKPLWTSSADRARRTAFLKA
LSGAADHGLPVKRYDGDQLAALFRSARTDQDRGRAEVEASRMFVQYAQDIQTGVLTPSAV
DDDIKRRPPRRDRLAQLVAFSKSSPRGYLRNLTPKSPEYNRLLAEKLRLERVLGQGGWGA
EVPGTGALKPGENGARVVALRDRLIAMGYLKRTATQTYDATLQKAVQAFQLDHGLFADGV
AGEVTLKEINQPASLRLQQVIVAMERERWMGDDRGGRHVLVNITDYHARIMENDKVLFQT
RSVVGQNSDDRRTPEFSDVMDHMIINPTWNVPRSIATKEYLPLLKKNPHAVNHLRLINAS
GQVVSRSAVDFSQFNERNFPFNMKEPPSQGNALGLVKFMFPNPYNIYLHDTPQKSLFARE
ARAFSHGCIRLNDPFDFAYALLDGQVADPEAFFHEKLETRRETQVNLARPLPVHIIYRTA
QTQPKGRVQFRRDVYGRDARIFAALNQAGVALRAVRG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ctggtatcgtccggcgggctggcggtatccgccgtggcccagtcggcgggcttcaagatc
gccgtggccgaaagcgccgcatcggacaaggatctggcggaattctatcgcgcgcgcgat
tacaagccgctctggacatcctccgccgatcgggcccgccgcaccgccttcctcaaggcg
ctgagcggggccgccgatcacgggcttccggtcaaacgctatgatggcgatcagcttgcc
gccctgttccgcagcgccagaaccgatcaggaccgcggccgcgccgaagtcgaggcgagc
cggatgttcgtgcaatacgcgcaggacatccagaccggggttctgaccccctctgccgtg
gatgatgacatcaaacgccgcccgccgcgccgcgaccgtctggcgcagctcgtggcgttt
tcgaaaagctcgccgcgcggctatctgcggaacctgaccccgaaaagcccggaatataac
cggcttctggccgaaaagctgcgcctggagcgggtgctggggcagggcggctggggcgcg
gaggtgccgggcaccggcgcgctgaagcccggcgaaaacggcgcgcgcgtggtggccctg
cgcgaccggctgatcgcgatgggctatctcaagcgcacagcgacccagacctatgacgcc
accttgcaaaaggcggttcaggcattccagcttgatcacggcctgttcgccgatggcgtt
gccggcgaggttacgctgaaagagatcaaccagcccgcaagcctgcgcctgcagcaggtc
atcgtcgcgatggaacgggaacgctggatgggggacgatcgtggcggtcggcacgttctg
gtgaacatcaccgactaccacgcccggatcatggaaaacgacaaggtgctgttccagacc
cgctcggtcgtcggccagaacagcgatgatcgacgcacgccggaattctccgacgtgatg
gatcacatgatcatcaacccgacatggaacgtgccgcgctcgatcgccaccaaggaatac
ctgccgctgctcaagaagaacccgcatgcggtgaaccatctgcggctgatcaatgccagc
gggcaggtcgtcagccgctcggcggtggatttctcgcagttcaacgagcgcaactttccg
ttcaacatgaaagagcccccctcgcagggcaatgcgctggggctggtgaaattcatgttc
cccaacccttacaacatctacctgcacgacacgccgcagaaatcgctgttcgcgcgtgag
gcgcgggcgttttcgcacggctgcatccgcttgaacgatccgttcgatttcgcctatgcg
ctgctggacggacaggtcgccgaccccgaggcgtttttccacgaaaagctggaaacgcgg
cgtgaaacccaggtcaatctggcgcggccgctgccggtgcacatcatctatcgcacggcg
cagacccagcccaagggccgggtgcagttccgccgggatgtgtacgggcgcgacgccaga
attttcgccgcgctcaaccaggccggggtagcgcttcgggccgttcggggctaa
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