Actibacterium sp. EMB200-NS6: TQ29_11020
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Entry
TQ29_11020 CDS
T04096
Name
(GenBank) 30S ribosomal protein S6 modification protein RimK
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
con
Actibacterium sp. EMB200-NS6
Brite
KEGG Orthology (KO) [BR:
con00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
con03009
]
TQ29_11020
Ribosome biogenesis [BR:
con03009
]
Prokaryotic type
ribosomal protein modification factors
TQ29_11020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
Rimk_N
RimB-like
GSH-S_ATP
ATP-grasp_3
GARS_A
Dala_Dala_lig_C
LysX_preATP_grasp
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ALG91936
LinkDB
All DBs
Position
2272518..2273930
Genome browser
AA seq
470 aa
AA seq
DB search
MDGTGNETGDFRLGWEEWAALPGLGLPALKAKVDTGAKTSALHAFDIEPFGPADRPRVRF
AVHPIPGREDLTIPCSADIVDRREVTSSNGETELRYVIRCDIAMGTRTWPIEVTLTDRGS
MAYRMLLGRQAFGDNVVISPGESFCQPRLSYDVYHSTAVREVAPARTLRIAVLSREEHNF
STRRIVAEGEKRGHVVEVIDTSRCYMAINALAPEVHYDGQRLPRYDAVIPRIGASFTSYG
TAVIRQFETIGTYCVNGSDGITASRDKLYAHQILARHRIGMPTTAFAASPKDNDSLIELV
GGAPLIVKLLESTQGKGVVLAETRKAAQSVISAFRGLKASFLVQHFVKEAAGEDIRCLVI
GGKVVAAMRRVAEPGEFRSNLHQGGRAEAVRITKTERETAVRAARAFRLNMAGVDLLRSD
DGPKVLEVNSSPGFEGIEKASSKNVAALLFDEIEKRVRPAPARRRTRSAG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaccggcaatgagactggcgattttcgcctgggatgggaagaatgggccgcc
ctgcccggcctcgggctgccggcgctgaaggccaaggtggacaccggggccaagacctcg
gcgctgcatgcgttcgatatcgagcccttcggcccggccgaccggccgcgcgtgcgcttc
gcggtgcatccgatacccgggcgcgaggatctgacgatcccctgctcggccgatatcgtc
gaccggcgcgaggtgacatcctcgaacggcgagacggaactgcgctatgtgatccgctgc
gacatcgccatgggcacgcggacctggccgatcgaagtgacgctgaccgaccgcgggtcg
atggcctatcggatgctgctgggccgtcaggcctttggcgacaacgtggtgatcagcccc
ggcgaaagcttttgccagccgcgcctgtcgtatgacgtgtatcactccaccgccgtgcgc
gaagtcgccccggcacggaccctgcgcatcgccgtgctcagccgcgaggaacataacttc
tcgacccggcgaatcgtggccgagggcgaaaagcggggccatgtcgtcgaggtgatcgac
acctcgcgctgctacatggcgatcaacgcgctggcgcccgaggtgcattatgacggccag
cgcctgccccgctatgacgcggtgatcccgcgcatcggcgcctcgttcacctcttacggc
accgcggtgatccgccagttcgaaaccatcggcacctattgcgtgaacggctctgacggg
atcaccgccagccgcgacaagctttatgcccatcagatccttgcgcgccaccgcatcggg
atgccgaccacagccttcgccgcctcgcccaaggacaatgacagcctgatcgaactggtg
ggcggggcgccgctgatcgtgaagctgctggaatcgacccagggcaagggcgtggtgctg
gccgaaaccaggaaggccgcgcaatcggtgatttcggcgtttcgcgggctcaaggccagt
tttctggtgcagcatttcgtgaaagaggcggcgggcgaggatatccgctgtctggtgatc
ggcggcaaggtggtggcggcgatgcgccgggtggccgagccgggcgagttccgctcgaac
ctgcatcagggcgggcgggccgaggcggtgcgcatcaccaagaccgagcgcgagacggcg
gtgcgcgcggcgcgggcgttccggctgaacatggcgggagtggatctgctgcgctcggac
gacgggccgaaggtgctggaggtgaattcatcgccggggttcgaggggatcgaaaaggcc
agctcgaagaatgtggcggcgcttctgttcgacgagatcgagaagcgggtgcgcccggcc
ccggcgcgcaggcggacacggagcgcgggctga
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