Actibacterium sp. EMB200-NS6: TQ29_12685
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Entry
TQ29_12685 CDS
T04096
Name
(GenBank) hypothetical protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
con
Actibacterium sp. EMB200-NS6
Pathway
con02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
con00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TQ29_12685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
con02000
]
TQ29_12685
Transporters [BR:
con02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
TQ29_12685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
TOBE_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ALG90889
LinkDB
All DBs
Position
complement(2618988..2620046)
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AA seq
352 aa
AA seq
DB search
MTDVSLVLRDLGKSYDGKTEVLSIDRLAISKGEFVSFLGPSGSGKTTTLMIVGGFETPTR
GEVIVSGKSIADVPAHKRDMGIVFQNYALFPHMSVAKNVSYPLRMRQVPRREADARVESA
LRMVGLQGFGNRTPSELSGGQQQRVALARALVFEPELVLLDEPLGALDKNLREQMQIELK
RIHAQTGATMIFVTHDQAEAMVMSDRIVVFSNGRIEQFGTPEEIYNRPKTRFVAEFIGDS
NFLQAVVSAGGQVELEAFGRRRLPAYRDLEPGRYEALIRPENIEVHSGANGPDCRPFDVE
DKHNYGDMAVLTGLIGTTPVRVKQPAMRVASVAKGGRVHLSVADAAIHLITG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgtttctctggtactgcgcgatctgggtaaatcctacgatggcaagaccgaa
gtgctttcgattgatcgactggcgatcagcaagggcgaattcgtatctttcctggggcca
tccggctctggcaagaccacgacgctgatgatcgtgggcgggtttgagacgccgacgcgg
ggtgaggtgattgtcagcggaaaatcgatcgcggatgttccggcgcataagcgtgacatg
gggatcgtgtttcagaactacgcgctgtttcctcatatgagcgtggcaaagaatgtctct
taccccttgcgaatgcgccaggtgcccaggcgcgaggctgacgcgcgggtcgagagtgcg
ttgcggatggtcggcctgcaagggttcggaaaccgcaccccgtccgagctttcgggtggt
cagcagcagcgcgtggcgctggcgcgcgcattggtgttcgagcccgaactggtgcttttg
gatgaaccccttggggcactggacaagaatctgcgcgaacagatgcagatagagcttaag
cgtatccatgcccagaccggcgcaaccatgattttcgtcactcatgatcaggccgaggcg
atggtgatgtccgaccgcatcgtcgtgttttccaatggcaggatcgaacagttcggaacg
cccgaggagatatacaaccggccaaagacgcggtttgtggccgagttcattggcgacagc
aatttccttcaggcggttgtgagcgcgggcggacaggtcgagctggaagcttttggccga
cgtaggctgcccgcctaccgggatctcgagccggggcggtacgaggccctgatccgcccg
gaaaatatcgaggtgcattcgggcgcgaacgggccggattgtcggcctttcgatgtcgag
gacaagcacaactatggcgatatggccgttctgacgggcctgatcgggacaacacccgtc
cgtgtgaagcagccggccatgcgcgttgcttcggtcgcgaagggcggccgcgttcatctg
agtgtcgcggatgccgctatccacttgatcacgggatag
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