Actibacterium sp. EMB200-NS6: TQ29_15900
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Entry
TQ29_15900 CDS
T04096
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
con
Actibacterium sp. EMB200-NS6
Brite
KEGG Orthology (KO) [BR:
con00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
con03000
]
TQ29_15900
Transcription factors [BR:
con03000
]
Prokaryotic type
Helix-turn-helix
Other families
TQ29_15900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
Sigma54_activat
HTH_8
GAF
Sigma54_activ_2
HTH_23
HTH_30
HTH_7
HTH_28
HTH_29
HTH_20
HTH_50
HTH_1
HTH_IclR
AAA_33
AAA
ATPase
nSTAND3
AAA_5
AAA_28
AAA_25
AAA_18
HTH_22
DUF815
HTH_17
Viral_helicase1
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
ALG91402
LinkDB
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Position
3270128..3271957
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AA seq
609 aa
AA seq
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MPESIQKEDWERFRALGSVPPSIREVVLRSWVRSQEDKQLGARNFAPSVAQEELRTIRRR
NARLRQAAQSVLERAGYMLSDSGAMLLLCDDRGVVMEATGDSRMLARGQENHLQPGGRWD
ERAIGTNAIGTALHMGKPITISGVEHFCEAIQRWSCAAAPVRCPASGEVLGAVDISGASG
ELSGPVSALSVTLALQIEEVMRSNGLREHQRLMASFLSGRSHWGGDEVLLLDGHGQPVWS
STAFDRAAEEATGGVGDVTRLIAPGEGDARAMAEQMRVLLPEAGVDIVGPPGEAQGVVVT
LKRATHRRGTPLSSGRAVTLSDIAATGPQMAEICDKAGRFVERGMPLLIEGAPGTGKETL
AQALHAAGAQAGRPFMIVDCSLLDPDMLRADQAAGTGFMQLAETGGTLCLDEPGQTPAGV
QALLAQALAALARERPAVQVMSLSAATLSECLRSGELRGDLHFRLSAAKLALPALSERRA
DIPGLLRQLSESCARARQDKALRFTPKAIMRLQAHPWPGNIRELRNLVETLSAISLNRLI
DVPDLPPEITAPAGEKRDDTLRQRERSAILDALADAGGNITQAARQLGISRSTLYLKLDQ
YGLPRGRRN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccggagagcatccagaaggaggactgggagcgattccgtgcgctggggagcgtgccc
cccagcatccgtgaagtcgtgctcagatcctgggtcagatcacaggaagacaagcagctt
ggcgcgcgcaatttcgcgcccagcgtggcgcaggaggaattgcgcaccatccgccggcgg
aacgcccggctgcgtcaggcggcgcaatccgtgctggagcgggcgggctacatgctcagc
gactccggcgcgatgctgcttttgtgcgacgacagaggcgtcgtgatggaggcgacgggg
gattcccgcatgcttgcgcgcggacaggaaaatcacctgcagcccggcgggcgctgggac
gagcgggcgatcggaaccaacgccatcggcacggcgctgcacatgggcaagcccatcacc
atttccggggtcgagcatttctgcgaagcgatccagcgctggtcctgcgccgccgcgccc
gtgcgttgcccggccagcggcgaggtgctgggggcggtggatatttccggcgcctcgggc
gaactgtcggggccggtctctgcactttcggtgacgctcgcgcttcagatcgaagaggtg
atgcgcagcaacgggctgcgcgaacaccagcgtctgatggcgtccttcctgtctggccgc
agccattggggcggtgatgaagtcttgttgcttgatggccatggccagccggtctggtcg
agcacggccttcgacagggcagcggaggaggcgaccggcggggtcggcgacgtgacccgg
ctgatcgcgcccggcgagggagacgcccgcgccatggccgaacagatgcgcgtgctcctg
cccgaggcgggggtggatattgtcggcccgccgggcgaggcgcagggcgtcgtcgtgacg
ctgaaacgtgcaacacaccggcggggtacgcccctgtcttcgggccgcgccgtcaccctg
tccgacatcgccgcgaccgggccccagatggccgagatctgcgacaaggcgggcaggttc
gtggaacgcggaatgcccttgctgatcgagggggcgccgggcaccggcaaggaaacgctg
gcgcaggcgctgcacgcggcgggggcacaggcggggcggccgttcatgatcgtcgattgc
agcctgctcgacccggacatgctgcgcgccgatcaggccgcaggcacaggtttcatgcaa
ctcgccgaaaccggggggacactctgtctcgatgaaccgggacaaacgcccgccggggtg
caggcgctgttggcacaggctctggccgcgctggcccgcgaacggcctgcggtgcaggtg
atgtccctgtccgcggcgacactgtcagagtgcctgcgatcgggcgagctgcgcggcgat
ctgcattttcgcctttcggcggccaagctcgccctgcccgcgctgagcgagcggcgcgcc
gacattccggggcttttgcgccagctctcggaaagctgcgcgcgggcacgccaggacaag
gccctgcgttttacccccaaggcgatcatgcgcttgcaggcccatccatggcccggcaac
atccgcgagctgcgcaatcttgtggagacgctgtcggcgatttcgctgaaccgtctgatc
gacgtgccggacctgccgcccgagatcaccgcgccagccggcgaaaaacgcgacgacacg
ctgcgccagcgcgaacggtcggcgatcctggatgcgctcgccgatgcgggcggcaacatc
acccaggccgcgcggcaactgggaatttcgcgctccacgctctacctcaaactcgatcaa
tacggcctgccacgcggccgccggaactga
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