Actibacterium sp. EMB200-NS6: TQ29_17790 Help Entry TQ29_17790        CDS       T04096                                  Name (GenBank) endonuclease   KO K18434   type IV secretion system T-DNA border endonuclease VirD2 Organism con  Actibacterium sp. EMB200-NS6 Brite KEGG Orthology (KO) [BR:con00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:con02044]     TQ29_17790 Secretion system [BR:con02044]  Type IV secretion system   Conjugal DNA-protein transfer (VirB/D) protein    TQ29_17790 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Relaxase Motif Other DBs NCBI-ProteinID:  ALG92088 LinkDB All DBs Position pNS6001:complement(11981..14314) Genome browser AA seq 777 aa AA seqDB search MRLNDAVHAVTGEVFRDGWSRVRGSMQGLHVAKQSQLVRAAAGHRPAVFKAIRGGGTHTK SQLANQLDYLTTKSTHIVDSSGFLDGKAKLEVKDIKDLTERFAKRWDAGFKPKLGQTTHM LMSFPIGTRGEDVRDIATDVAERFFQTDAGHFDYIIAVHEDRDHPHAHLVLNRRSQEGEF FFLGRNHRFNYDDFRLAMVEEAEKYGVRLEATRRVDRGVVHYPARTSEVYAAKEEGRAPR ERERVGADLTRTLAEIANTRTVYHSLAAEASREAREDIASALFRAGEVLAHGGQVDRTGD VYMAEDQSFEDLRSLYAEKLARVQGMIAEKSDADRPVLEKRLIEIQAQVQHMQPLGLRSS TLSETPSEGGIYSEENIDTNQLARLAEPDLRSRIDAALRGTGISTSEVVARIETGASSAA LEHQWIADDLSKVAEARDLNLERRADLEQARDILNNVHVELGTLLERENVLRRDGVMEAE PVSERFHYHRDAVRAMEGTIRQEMRAEGLTAQQIEERDWEVVSRAERRIEAEQRAYIEAH PDLLARPGDVIDRSEPYRETITDAARASEIIREVDRIMEARDLRMPVADAVTDDLRARYP DMPSHLARGLGATYAAVVEIRDTEAINQVRRDNELREGLGVGTRDAPLATRDETAPQTDR TDRLADEIKRVLDHERAGELSAPFETEAERDAFRDEIARVLDVRQLDRLTSGDADALEKV LEDRLDRLYVAKVYLQSDAATANTEALRQVVDDLADTEYEKHRTTDVDGETERGQVH NT seq 2334 nt NT seq  +upstreamnt  +downstreamnt atgcggctgaatgatgccgtccatgccgtcacgggcgaggtcttccgggatggctggagc cgcgttcggggctcgatgcaggggctgcatgtggccaagcagagccagcttgtgcgcgcg gctgcggggcatcggccagcggtcttcaaggcgatccggggcgggggcacgcataccaaa tcgcagctcgcaaaccagctcgactaccttaccaccaagtctacccatatcgtcgacagt agcgggtttctggatggcaaggcgaagctcgaggtcaaggacatcaaggacctgaccgag cgctttgccaagcggtgggatgcgggtttcaaacccaagctgggccaaaccacccacatg ctcatgtccttccccatcggtacgcgcggcgaggatgtgcgcgacatcgcgacggacgtg gccgagcggttcttccaaaccgacgcggggcatttcgactacatcatcgcggtgcatgag gaccgcgatcacccccatgcgcatctggtgctgaaccgtcgctcgcaagagggcgagttc ttctttctggggcggaaccaccgcttcaactatgacgacttccgcctcgcaatggtcgag gaggcggagaagtatggcgtgcgcctggaggccacgcgccgagtggatcgcggcgtcgtg cattacccggcccgcaccagcgaggtctacgccgcgaaagaagagggtcgcgcgccccgc gagcgcgaacgcgtgggggccgacctgacccggacgctggcggagatcgccaacaccaga accgtctaccactcgcttgctgcggaggcttcgcgtgaagcccgcgaggatattgcgtcg gccctcttccgcgcgggcgaggtgctggcgcatggcgggcaggtggaccgaacaggagat gtgtatatggcagaggatcagagtttcgaggatctgagaagcctctatgcggagaagctc gcgcgggtgcagggcatgatcgccgaaaaatctgacgcggaccgacccgtgctggaaaag cgccttatcgagatccaggcgcaggtccagcacatgcagcctctcggattgcgatcatcc acgctgtcagagaccccctcggagggcgggatctattccgaggagaacattgacaccaac cagctcgcgcgactggccgagcccgacctgagatcgcgcattgacgcggccctgcggggt accgggatcagcacatccgaagtcgtggcccggatcgagaccggtgcttcgagtgcggct ctcgagcatcaatggatcgccgacgatctctccaaggtcgctgaagcccgcgatctgaat ctcgaacgccgcgccgatctggaacaggcgcgcgacattctcaacaatgtccatgtcgag cttggcacgcttctggaacgggagaacgtgctgcgccgggatggtgtcatggaagcggaa ccggtcagtgagcggttccattatcaccgggacgcggtccgggcgatggaagggacaatc cgtcaggagatgcgcgcagagggcctgaccgcgcagcagatcgaggagcgggactgggag gttgtctcaagggcggagcgccggatcgaggcggagcagcgcgcatatatcgaggcacac ccggacttgctcgcacgtcccggcgatgtgatcgaccggtctgagccctacagggagacc atcaccgatgcggcccgcgccagcgagatcatccgcgaggttgaccggatcatggaggca cgcgacctccgcatgcccgttgcagatgctgtcacggatgacttacgagcgcgctatccg gacatgccgtcccacctcgcccgcgggctcggcgcgacctacgcggccgtcgtcgagatc cgggacacggaggccatcaatcaggttcgccgcgacaacgagttgcgcgaggggcttggg gttggcacgcgtgacgcacccctcgcgacccgcgatgaaacggcgccgcagactgaccgt accgaccgccttgcagacgagattaagcgtgttctggaccatgagcgggcgggggagttg tccgcgcccttcgagaccgaggcggagcgggacgcatttcgcgacgagatcgcgcgggtg ctggacgttcgccaactcgaccggctcacatccggcgatgccgatgcgctggagaaggtt ctcgaggaccgcctcgaccggctctatgtcgccaaggtctatctgcaatccgatgccgcg acggccaacacggaggccttgcgccaggtggtcgatgatcttgccgacaccgaatacgaa aaacaccgcaccacagacgtggatggcgagaccgagcggggtcaggtccattga

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