KEGG   Actibacterium sp. EMB200-NS6: TQ29_20110
Entry
TQ29_20110        CDS       T04096                                 
Name
(GenBank) conjugal transfer protein TraF
  KO
K03200  type IV secretion system protein VirB5
Organism
con  Actibacterium sp. EMB200-NS6
Pathway
con03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:con00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    TQ29_20110
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:con02044]
    TQ29_20110
Secretion system [BR:con02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   TQ29_20110
SSDB
Motif
Pfam: T4SS FliJ Mod_r T6PP_N PCRF pAdhesive_17 Baculo_F MCU Zw10_N COMPASS-Shg1 DUF7801 PT26-6P_helical TorS_sensor_domain DASH_Dam1 TMP_3
Other DBs
NCBI-ProteinID: ALG92528
LinkDB
Position
pNS6003:139280..140089
AA seq 269 aa
MGHLLMRTALATTLGFGLHLGTPSPALAQGVPVVDTQNIAQNIQQLRQMIEDEILQNEQL
TQLREQLATLTDQLAELQRTYEALTRLAELPEIIRTEMEDELNGLLDQEFGDILATIEAI
KTGDFSGLSGSGAGEIETQMDRVLADLGFDEDTLSELATSGNPGANRVATQATTGALVSA
AAQNSYEGAGQSLERVDRLVGLIDDMDELKESIDLNTRVTAELAIALVAMWQLEAVQTVG
DGTGGVIDAATIAEEQRFMDFTLPELRAD
NT seq 810 nt   +upstreamnt  +downstreamnt
atgggacatttgctcatgagaacggccttggccacgacacttgggtttggcctgcatctc
ggcaccccgtcccccgccctggcgcaaggcgtgcccgtcgtcgatacccagaacatcgca
caaaacatccagcagctccggcagatgatcgaggacgagatcctgcagaatgagcagctg
acgcagctccgcgaacagcttgccacactcacggatcaactcgcggagctgcaaagaacc
tatgaagcgctcacccgacttgccgagcttcccgaaatcatccggacggaaatggaagac
gagttgaacggtctgctcgaccaagagttcggggacatcctcgccacgattgaggcgatc
aagactggggatttctcgggcctctcgggctccggcgcaggcgaaatcgaaacccagatg
gaccgggtgctggccgatctcggcttcgatgaagacacgctctcggaattggccaccagc
ggcaatcccggggccaatcgcgtagccacgcaagccacgactggcgccctcgtctcggcc
gctgcccagaacagctacgagggcgcgggccaatcgctggaacgcgtcgaccggctggtc
gggctgatcgatgacatggacgaactgaaggaaagtatcgacctcaacacgcgggtgacg
gcggagctggcaattgccctcgtcgccatgtggcagcttgaggccgtgcaaaccgtgggt
gacggcacaggcggcgtgattgatgccgccacaatcgccgaagaacagcgcttcatggat
ttcaccttgcccgagttgcgtgcggattga

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