Coprococcus sp. ART55/1: CCU_02920
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Entry
CCU_02920 CDS
T02583
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
coo
Coprococcus sp. ART55/1
Pathway
coo03030
DNA replication
coo03430
Mismatch repair
coo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCU_02920
03430 Mismatch repair
CCU_02920
03440 Homologous recombination
CCU_02920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coo03032
]
CCU_02920
03400 DNA repair and recombination proteins [BR:
coo03400
]
CCU_02920
Enzymes [BR:
coo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCU_02920
DNA replication proteins [BR:
coo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCU_02920
DNA repair and recombination proteins [BR:
coo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCU_02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CBK82187
LinkDB
All DBs
Position
complement(290759..294343)
Genome browser
AA seq
1194 aa
AA seq
DB search
MEFTHLHVHTGYSLLDGAAKIDGLVRRAKELGYDSLAITDHGVMYGVIEFYETCLREGIK
PILGCEVYVSPGSRFDREVGKGDDRYYHLVLLAENDLGYHNLSKIVTRGFTEGFYYKPRV
DMEVLEKYHEGIIALSACLAGEVATKLRKGDYDGAKETAIRYRNIFGEENYFLEMQDHGI
PEQATVNAGIMRLSKELGIPMVVTNDSHYIYAEDWEAHDVLLCIQTNHKVQDENRMRYDG
GQFYLKSKEEMAELFPYALEALENTHKIAERCNVNIVFGEQKVPRFDVPEGYTAEEYLDH
LVYEGMEKKYGLTYEESGKMAEGTHGYEVRQRIDYELSVIKSMGFVDYFLIVWDFIHFAK
SQGIAVGPGRGSAVGSVVAYCLDITTIEPLQYNLLFERFLNPERVSMPDIDIDFCYIRRQ
EVIDYCVRKYGEECVTQIIAYQTMGARNVIRDVGRAMDLPYAVCDSLAKAIPAEKDMTID
IALKTSKDFRDMYEGSDEIKKLVDIARKLEGLPRNAGMHAAGVVIGREAIEEYAPLSVGA
EGAVVTQFEKNTVEHLGMLKMDFLGLRTATVVQDTVKLVKQTTGKDIDIDNIDYDDPNIL
GLMGQGKTEGMFQLESEGMRNFMMKLKPQSLDDVIAGVALFRPGPMQFIDDYIRGKENRE
LVHYDTPELEEILEPTYGCIIYQEQVMQIVMKLAGYTLGRSDLVRRAMAKKKPEEMEKER
HNFVYGNKELNVPGCVANGISETVANKIFDEMMKFAEYAFNKSHSVAYAVLAAQTAYLKY
YYPVEFMAALMSSVIDNNGKVAKYISVCKQMGVEVLPPDINEGVAKFSISNGKIRYGLSG
IKSVGGAVVDRIEAERTKNGPFKDLRNFLTRMPSKDTNKKTVEALILSGAFDDMGANRKQ
MMMALPAIAEEAARERKSRESGQMSLFDLMGDDFVQSNLVPYPDVEEYSDQEKLALEKSV
LGVYISGHPLGKYIELMQRTCTAQATDFVVDTEDDDEMSRDQGDGDGQKLQDNAMYVIGG
LISRVTVKLTKNNQNMAYVTIEDLVGQVEVIVFPRDFEKFRDRLLVDSRVFVRGRANLGE
KENKLILSDMISFEEAEGGKSFQSGKPWNNRQKPVQSNSQLWVLFDDVDEYMKNESAFMS
ILEEYKGTCPVYVQLKKSRQAKNMGRGFCVDENSGVVYALQMEYGKDRVLLRKV
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggagtttacacatctgcatgtgcatacaggctacagtctgctggacggtgcggcgaag
atagacggacttgtgcgcagggcaaaggaactgggatatgattccctcgcaataacggat
cacggcgtcatgtacggtgttatagagttctatgagacttgtctcagagaggggataaaa
cctattctcggatgtgaggtgtatgtcagtccgggatcacgatttgacagggaagttgga
aagggtgatgacagatattatcacctcgtccttctggcggagaatgatctgggatatcac
aatctgtccaagatcgtgaccagaggatttaccgagggcttttactataagccgagggtc
gatatggaggtgctggagaagtaccatgagggaattatagcgctcagcgcctgtcttgcc
ggtgaggttgcgacaaagctcagaaagggcgactatgacggtgcgaaggagactgcgata
agatacaggaatatatttggcgaggaaaactattttctggagatgcaggatcacggaata
cctgagcaggcaactgtgaatgcggggatcatgcgtctgtcaaaggaactgggtatccct
atggtcgtgacaaatgattcgcactacatctatgccgaggactgggaggcacatgatgtt
ctcctgtgtatacagactaaccacaaggttcaggacgagaacagaatgcgctatgatgga
ggtcagttctacctcaaatcaaaggaggagatggctgagctgttcccatatgccctggag
gctctggagaatacacataagatcgcagagcggtgtaatgtgaatatcgtatttggcgag
cagaaggttccgagattcgatgtgccggagggatataccgcggaggaatatctggatcat
ctggtatatgagggtatggagaaaaagtacggacttacatatgaggagtccggtaagatg
gccgagggaacccacggctacgaggtcagacagagaatagattatgagctgtctgtcata
aagagcatgggatttgtggattatttcctgatagtgtgggatttcattcattttgcaaaa
tcgcagggaatcgcagttggacctggaagaggttcggcggttggcagtgtggttgcttac
tgtctggatataacgacaattgagcctttgcagtacaaccttctcttcgagagattcctg
aacccggagcgagtatccatgccggatattgatatagatttctgttatatcagacgtcag
gaggttatcgactactgtgtaaggaaatatggcgaggagtgcgtgacacagataatagca
tatcagaccatgggcgcaagaaacgtcataagagacgttggaagagccatggatctcccg
tatgcggtgtgtgattcccttgcaaaggcaatacctgcagagaaggatatgactatagat
atagcactcaagacgagcaaggatttcagggatatgtacgagggctcggacgagatcaag
aagcttgtggatatagccagaaagcttgagggactccctagaaatgcaggaatgcatgcg
gcgggagtggttataggccgtgaagccatagaggagtacgcgcctttgtcagtcggagcc
gagggcgcggtggtaacccagtttgagaagaacacggtggagcatctgggaatgctcaag
atggacttcctgggactccgtacggcgactgttgtgcaggatacagtcaagctggtcaag
cagacaacaggcaaggatatagacatagacaatatagattacgatgatccgaatatactt
ggactcatgggacagggaaagaccgagggtatgttccagctcgaaagtgagggcatgaga
aacttcatgatgaagctgaagccgcagagtctggacgatgtaattgccggtgttgctctg
tttagaccgggtcctatgcagttcatagacgactacatcaggggcaaggagaaccgtgag
ctggttcactatgatacccctgagcttgaggagatacttgagccgacttacggatgtatc
atttaccaggagcaggtaatgcagatcgttatgaagctggcgggctatacgctgggaaga
agtgaccttgtgcgccgagccatggcgaagaagaagcctgaggagatggagaaggagcgt
cataactttgtgtacggcaacaaggagctcaatgttccgggatgtgtggcaaatggaatc
tcggagaccgtggcaaataagatatttgacgagatgatgaagttcgcggagtacgcattt
aacaagtcccactccgtggcatatgcggtacttgcggcgcagacagcgtacctgaagtat
tactatccggtggagttcatggctgcgctgatgtcatcggtaattgacaacaatggcaag
gttgcaaagtatataagcgtgtgcaagcagatgggtgttgaggtgctccctccggatata
aatgagggagtggcaaagttctccataagcaacggcaagataagatacggcctctccggt
atcaagagtgtcggaggcgctgttgtcgacaggatagaggcggagagaaccaagaatgga
ccgtttaaggatctcaggaatttcctcacaaggatgccttcaaaggatacaaataagaaa
actgtggaagctctgatactcagcggtgcatttgatgatatgggagcaaacagaaagcag
atgatgatggctcttccggccatagcggaggaagcagcaagggagagaaagagcagggag
tccgggcagatgtctctgtttgacctgatgggagacgattttgtgcagagcaatcttgta
ccttaccctgatgtggaggagtattcggatcaggagaagctggcgcttgagaagtctgtg
ctcggagtgtatatatcgggacatccgcttggcaaatatatcgagcttatgcagagaaca
tgcacggctcaggcgacggatttcgtggtggacaccgaggatgacgatgagatgagccgg
gatcagggtgacggagatggacagaagcttcaggacaatgcaatgtatgtcatcggcgga
ctcatatcaagggtgacggtgaagctcaccaagaacaatcagaatatggcgtatgtgacg
atagaggatctggttggacaggttgaggttatagtattcccgagggatttcgagaagttc
agggacagacttctggtggattccagagtgtttgtcaggggcagggcgaatctcggtgag
aaggaaaacaagctcatattgtcggatatgataagctttgaggaggcagaaggtggcaag
agctttcagtcggggaagccatggaataacagacagaagcctgttcagagcaacagccag
ctctgggtattgttcgatgatgtggacgaatacatgaagaacgagtctgcatttatgtcg
atccttgaggagtacaagggcacatgtccggtgtacgtgcagctcaagaagtccagacag
gcgaagaatatgggccggggattctgtgtggatgagaattccggcgtggtgtacgcgctc
cagatggaatacggcaaagacagggtattgctcagaaaagtgtga
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