Coprococcus sp. ART55/1: CCU_06500
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Entry
CCU_06500 CDS
T02583
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
coo
Coprococcus sp. ART55/1
Brite
KEGG Orthology (KO) [BR:
coo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coo03032
]
CCU_06500
03400 DNA repair and recombination proteins [BR:
coo03400
]
CCU_06500
Enzymes [BR:
coo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCU_06500
DNA replication proteins [BR:
coo03032
]
Prokaryotic type
DNA Topoisomerases
CCU_06500
DNA repair and recombination proteins [BR:
coo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCU_06500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Zn_ribbon_IS1595
Toprim_2
MTR4-like_stalk
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-ProteinID:
CBK82454
LinkDB
All DBs
Position
complement(629470..631596)
Genome browser
AA seq
708 aa
AA seq
DB search
MIRITGNLQKGQIAMAKNLVIVESPAKAKTIKKFLGSNYEVIASNGHVRDLPKSQMGIDV
DNDFEPKYITIRGKGDILAALRKAVKKADKIYLATDPDREGEAISYHLMKALKLENKDYK
RITFNEITKNAVKNSIKQARDIDMNLVDAQQARRVLDRLVGYKISPVLWAKIKRGLSAGR
VQSVALKLVCDREKEINDFIPQEYWTLDANLTGGKLKKPITFKFTGDGKNKEEISGRAAL
DEILSGLQDGEYVVKSIKESERNKKAPLPFTTSTLQQEASSKLNFATSKTMRIAQQLYEG
VDIKGRGTIGLITYLRTDSTRISEEAVAAADKYITDNFGEIYIGDSNGRAKTDKKIQDAH
EAIRPTDVTLSPVMVKEQLSRDQFRLYQLIYNRFLASQMAGAVYSVKSVKVSCGDATFQT
SASKIAFDGFLAVYNLDNDRGETVAGINNLAEGDVLELDGFEEKQHFTQPPARYTEALLV
KTLEELGIGRPSTYAPTISTILARRYITKEQKKLYVTAIGDAVNQSMEQAFPVIIDVNFT
ANMESLLDKIGEGTVDWKVVVRNFYPDLDEAVKKAEAELESIKIEDEVSEEVCDVCGRNM
VIKYGPHGKFLACPGFPECRFTKPFYEKIGVTCPKCGGDVVIKTTRKGRRYYGCINAPEC
DFMSWAMPSNEKCPECGKYMIVKGNKLVCSDQECGYTCNNKAAETADK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgataagaattacaggaaacctacagaaaggacagatagctatggcaaaaaatcttgtt
attgttgagtctccagctaaagctaagacaataaaaaagtttcttggatcaaactatgag
gtgattgcttcgaatggccatgtgagagatctgccaaagagtcagatgggaatagacgtt
gataatgatttcgagcccaaatatatcactataaggggtaaaggtgatattcttgccgct
ctgagaaaagcggttaagaaggccgacaagatctatctcgcaactgacccggaccgtgag
ggagaggctatatcctatcatttgatgaaagcacttaagctggagaataaggattacaag
agaattacgttcaatgagattacaaagaatgcggtaaagaattctataaagcaggcaagg
gacatagacatgaaccttgtggatgcccagcaggcgagacgagtgctcgacagacttgtt
ggttacaagatcagcccggttctctgggcaaagatcaagagaggtctttctgccggacgt
gtacagtctgttgcgctcaagctcgtgtgtgacagggagaaggagataaatgattttatc
ccgcaggaatactggacactggacgcgaatctgaccggcggcaagctcaagaagcctatc
acgttcaagtttaccggagatggtaagaataaggaagagatatcaggcagagcggcactc
gatgagatactcagcggtcttcaagatggagagtacgttgtaaagtccataaaagagagt
gagagaaacaagaaggcaccgctgccatttacaacaagtacgctgcagcaggaggcttca
tcgaagctcaattttgcgacatccaagacgatgaggatcgcacagcagctctatgaggga
gttgatatcaagggccgtggaacgataggtctcataacatacctgagaacagattccact
agaatatcagaggaagcagttgctgctgctgacaaatatataacggacaatttcggtgag
atatatattggcgattcaaatggacgcgccaagacagacaagaagatacaggatgctcat
gaggctatcagacctacagatgtgactctgtcaccggtcatggtaaaggaacagctctca
agggatcagttcagactgtatcagctcatatataatcgtttccttgcaagccagatggcg
ggggcggtatattctgtcaagagtgtaaaggtaagctgcggcgatgcgacattccagaca
tccgcatcaaagatagcatttgacggattccttgctgtatacaatctggacaatgacaga
ggagagacagttgcgggaatcaacaatcttgctgagggcgatgtgctggagcttgacggc
tttgaggagaaacagcattttacacagccgcctgcaagatatacagaggcattgcttgtc
aagacattggaggagcttggaattggaagaccaagtacctatgctccaaccatatcgacc
atacttgcgagaagatatataacgaaggaacagaagaagttatatgtgacagccataggt
gatgcggttaaccagagcatggagcaggcgttcccggttatcatagatgtgaatttcacg
gctaacatggagtctcttctcgataagataggagagggaaccgtggactggaaagtggtt
gtccgcaatttctatccggatctcgacgaggcggtgaagaaggcggaggcagaacttgag
tccatcaagatagaggatgaggtgtccgaggaagtgtgtgacgtgtgcggacgaaacatg
gtcatcaagtatggtcctcacggcaaattcctggcgtgtcctggattccctgagtgcaga
tttacaaagccgttctacgagaagataggtgttacctgtcctaagtgtggcggagacgtg
gtcatcaagacgacgagaaagggtagaagatactatggatgtatcaatgcacctgagtgt
gatttcatgtcatgggcaatgccaagcaatgagaaatgtcctgaatgtggaaagtacatg
atagtaaagggcaataagctggtatgctcagatcaggagtgtggttatacctgcaacaac
aaggcggcggagactgctgataaataa
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