Coprococcus sp. ART55/1: CCU_12600
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Entry
CCU_12600 CDS
T02583
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
coo
Coprococcus sp. ART55/1
Pathway
coo03420
Nucleotide excision repair
coo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
coo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCU_12600
03430 Mismatch repair
CCU_12600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coo03400
]
CCU_12600
Enzymes [BR:
coo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCU_12600
DNA repair and recombination proteins [BR:
coo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCU_12600
MMR (mismatch excision repair)
Other MMR factors
CCU_12600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
CBK82910
LinkDB
All DBs
Position
complement(1263694..1266042)
Genome browser
AA seq
782 aa
AA seq
DB search
MAGLNDMQEQACEHVDGPLLILAGAGSGKTRVITHRVAYLMEHEGVNPLNILAITFTNKA
AREMRERVDLIVGDGADRVWVSTFHSLCVRILRRYADKIGYGKNFDIYDSDDQKSTVKSI
LKDFQIDPKRYPEKMFMAEISKAKEKYLSPDEFAKKNAADYAGTKAAEVYTEYQSRLKKN
NAMDFDDLIYKTVELFEHNPDVLDTYQNRFRYIMVDEYQDTNHIQFLLVKMLARKYRNLC
VVGDDDQSIYKFRGANITNILNFEKEYEDAKVIKLEQNYRSCGNILAAANAVIQHNAGRK
DKALWTDKDAGEKISFEQCDSEYAEGDMVASRIKTLVRQGVDYRDIAILYRTNAQSRVLG
EKMVYANIPYRVYGGTNFYARKEIKDVLAYLKVINNSTDNLYFRRVVNVPKRGIGEASLS
KVESFADAYGLSMMDAAARADEIPGMAAKTSAKIRQFAELITSFRDMLADGESLDSVYDR
ILEDTGYESELIAEHTEEAMTRLENIDELRNKVVEFTEDNEEAGLSEFLEEIALVSDLDA
MSEDDNQVKLMTLHSAKGLEFPYVFICGMEDRVFPSGMALNSDDPDALEEERRLCYVGIT
RAMKKLYLSAAKERMMHGNRVYSDVSRFIREIPPMLFEHEADMKNMAKRRESESVDRYNR
GEGRRDAYGSSYGDTYAGYGGGRTAGAASGRSYGQKNPYSSYAKQQSYGQPSSQPSFGKA
FVVNSVGKPDYAVGDRVRHIKFGPGTVEALEKGDKDYEVTVNFDRCGVRKMFASFAKLKK
CE
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacttaacgatatgcaggaacaggcctgtgagcatgtggatgggccactgctc
atacttgcgggagcaggaagcggaaagaccagggttatcacacacagggtagcctatctc
atggagcacgaaggagttaatcctctgaacatactggcaatcacattcaccaacaaggcg
gcccgtgagatgcgggagagagttgatctaatagttggggacggagctgacagggtatgg
gtcagcacatttcattcgctgtgtgtgaggatactcagaagatatgctgataagatcggc
tatggcaagaactttgatatatatgattcggatgaccagaagagtacggtgaagagtata
ctcaaggattttcagatagacccgaagaggtatcccgagaagatgttcatggcggagata
tccaaggccaaggagaagtatctgtcacctgatgaatttgcaaaaaagaatgctgcagac
tatgcaggaacaaaggctgcagaggtgtacactgagtatcagagtcgtcttaagaagaac
aatgcgatggactttgacgatcttatttacaagacggtggagctgttcgagcacaatcct
gatgtccttgatacatatcagaatagattcagatatatcatggttgacgagtatcaggat
actaatcacatacagtttctgctggtcaagatgcttgcgagaaaatacaggaacctgtgt
gtggtgggagacgatgatcagtccatatacaagttcagaggagcgaatataaccaatatc
ctgaactttgagaaggaatatgaggatgcgaaggttatcaagctggaacagaactataga
tcctgtggcaatatacttgccgcagcgaatgcagtcatacagcacaatgcaggccgtaag
gataaggctctgtggacggataaggatgccggtgagaagatctcgtttgagcagtgcgat
tcggaatatgcagagggagatatggtggcgagccgtatcaagactcttgtcagacaggga
gtggactacagggatatagctatcctctacaggacgaatgcacagtcccgtgtgctcgga
gagaagatggtgtatgcgaacataccatacagagtatatggcggcacaaacttctatgcc
cgaaaggagatcaaggatgttctggcatatctcaaggtcatcaacaattccactgacaac
ctgtacttcaggagagtggtaaatgttccgaagagaggtataggcgaggcgagtctcagc
aaggttgagtcatttgcggatgcgtatggattgtcgatgatggatgctgcggcgagagct
gacgagataccgggaatggctgccaagacctcggccaagatcaggcagtttgcggagctt
atcacatcattcagggatatgctggcggatggtgagagccttgactcggtgtacgacagg
atccttgaggatacgggttatgagtcagagctcatagcagagcacacagaggaggccatg
actagacttgagaatatcgatgaactccgcaacaaggtggtggaattcacagaggataat
gaggaggcagggctcagcgagttcctggaggagatagcgcttgtgtctgacctcgatgcc
atgtcggaggatgacaatcaggtcaagctgatgactctccacagtgccaagggtctggag
ttcccatacgtatttatatgcggaatggaggacagagtatttcctagtggaatggcactc
aactcagatgatcccgatgctcttgaggaggagagacgtctgtgttacgtgggtataacc
agagccatgaaaaagctgtacctgagtgcggcgaaggaacgaatgatgcatggtaacagg
gtgtacagcgatgtgtccagattcataagagagatcccgcctatgctgtttgagcatgaa
gctgatatgaagaatatggcaaagcgaagagagtcggagtctgtcgacagatataacaga
ggtgaaggacgcagagatgcgtatggaagttcatatggtgatacatatgccggctatggc
ggtggaagaaccgctggagcagcctcaggcagaagctatggacagaagaatccatacagc
agctatgcaaaacagcagtcatacgggcagccgtcttcccagccttcgttcggcaaagcc
tttgtggtaaacagtgttggcaagccggattatgctgttggagacagagtcagacatatt
aagtttggtccgggtactgtggaggctttggagaagggcgataaggattacgaggttaca
gtgaatttcgacagatgcggtgtcaggaagatgtttgcttcgtttgcaaagctcaaaaaa
tgcgagtag
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